RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LMX1AQ8TE12 382 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 FAM172AQ8WUF8 416 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 PTH2Q96A98 100 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 TESCQ96BS2 214 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 ABHD14BQ96IU4 210 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 PARD6GQ9BYG4 376 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 BABAM2Q9NXR7 383 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 MRPS16Q9Y3D3 137 aaKnown RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 FIS1Q9Y3D6 152 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 HIVEP3Q5T1R4 2406 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPTAN1Q13813 2472 aaKnown RBP2.84□□□□□ -1.96
HMGB1P3-201ENST00000502802 ESPL1Q14674 2120 aa2.84□□□□□ -1.96
HMGB1P3-201ENST00000502802 DCHS2Q6V1P9 2916 aa2.84□□□□□ -1.96
HMGB1P3-201ENST00000502802 SHANK1Q9Y566 2161 aa2.84□□□□□ -1.96
HMGB1P3-201ENST00000502802 NBPF19A0A087WUL8 3843 aa2.84□□□□□ -1.96
HMGB1P3-201ENST00000502802 TACC2O95359 2948 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 ZGRF1Q86YA3 2104 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 TNFSF15O95150 251 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 CALB1P05937 261 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 OR4A8P0C604 315 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 HRES1P13985 223 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 CDK2P24941 298 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 RPL12P30050 165 aaKnown RBP2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 CCL7P80098 99 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 SRSF6Q13247 344 aaKnown RBP2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 UAP1Q16222 522 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 ACSBG2Q5FVE4 666 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 CD200R1LQ6Q8B3 271 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 DCXRQ7Z4W1 244 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 NAA40Q86UY6 237 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 PHF13Q86YI8 300 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 LRRC34Q8IZ02 419 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 UMODL1-AS1Q8N2C9 162 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 LYPD1Q8N2G4 141 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 TEX47Q8TBZ9 253 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 RAB8BQ92930 207 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 SLC25A44Q96H78 314 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 MCEEQ96PE7 176 aa2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 DIDO1Q9BTC0 2240 aaKnown RBP2.83□□□□□ -1.96
HMGB1P3-201ENST00000502802 NUP210LQ5VU65 1888 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 HEATR5BQ9P2D3 2071 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 TRAV8-1A0A0A6YYK1 113 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 SMIM23A6NLE4 172 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 SLC25A20O43772 301 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 DEDDO75618 318 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 TNFP01375 233 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 IGKV1-17P01599 117 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 OPN1SWP03999 348 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 ISG15P05161 165 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 CD5P06127 495 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 RPS17P08708 135 aaKnown RBP2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 CRABP1P29762 137 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 NKX2-5P52952 324 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 LINC00313P59037 77 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 TPI1P60174 286 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 HERVK_113P63121 156 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 SLC35A2P78381 396 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 IHHQ14623 411 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 OR8G1Q15617 311 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 ZNF141Q15928 474 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 NDUFA5Q16718 116 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 DCUN1D2Q6PH85 259 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 SLC51BQ86UW2 128 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 GKN2Q86XP6 184 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 HS3ST5Q8IZT8 346 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 ZFAND2AQ8N6M9 145 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 CCDC112Q8NEF3 446 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 OR2V1Q8NHB1 315 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 CCL4L1Q8NHW4 92 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 CD200R1Q8TD46 325 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 EEF1AKMT1Q8WVE0 214 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 SNRNP25Q9BV90 132 aaKnown RBP2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 MRPS26Q9BYN8 205 aaKnown RBP2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 TRIM4Q9C037 500 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 HRASLSQ9HDD0 168 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 MRPL40Q9NQ50 206 aaKnown RBP2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 POLR1DQ9Y2S0 133 aa2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 SAMHD1Q9Y3Z3 626 aaKnown RBP2.82□□□□□ -1.96
HMGB1P3-201ENST00000502802 CELSR1Q9NYQ6 3014 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 IGKV1D-17A0A075B6S4 117 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 A0A1B0GU33 70 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 LINC00862A6NCI5 91 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 J3QKU1 62 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 MRASO14807 208 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 ACOX3O15254 700 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 TGOLN2O43493 480 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 CPSF4O95639 269 aaKnown RBP2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 SOD1P00441 154 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 IFNA5P01569 189 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 IFNA14P01570 189 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 RNASE2P10153 161 aaKnown RBP2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 CCL4P13236 92 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 PPP1CCP36873 323 aaKnown RBP2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 AKR1C2P52895 323 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 CEBPGP53567 150 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 RAB4BP61018 213 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 AP1S1P61966 158 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 FABP5Q01469 135 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 MYL5Q02045 173 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms