RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 NXF2Q9GZY0 626 aaKnown RBP8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 TMEM231Q9H6L2 316 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 RHBDL2Q9NX52 303 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 OR51B2Q9Y5P1 312 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 IGHV4-4A0A075B6R2 117 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 DNASE2O00115 360 aaPredicted RBP8□□□□□ -1.13
SNRNP200-207ENST00000493271 AMBPP02760 352 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 FXYD4P59646 89 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 HERV-K104P61576 105 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 CTF1Q16619 201 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 CMTM1Q8IZ96 169 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF114Q8NC26 417 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 OR5AP2Q8NGF4 316 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 VSIRQ9H7M9 311 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 FAM212BQ9NTI7 297 aaPredicted RBP8□□□□□ -1.13
SNRNP200-207ENST00000493271 DAPK2Q9UIK4 370 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 DNAH11Q96DT5 4516 aa8□□□□□ -1.13
SNRNP200-207ENST00000493271 IGKV3-7A0A075B6H7 116 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 IGHV3-21A0A0B4J1V1 117 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF705EA8MWA4 302 aaPredicted RBP7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 DEFB4AO15263 64 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 ST8SIA3O43173 380 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 GNG7O60262 68 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 HLA-DMBP28068 263 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 GNRHRP30968 328 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 DEFB131AP59861 70 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 SFXN4Q6P4A7 337 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 TMEM17Q86X19 198 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 GBGT1Q8N5D6 347 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 POM121L12Q8N7R1 296 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 LGALS14Q8TCE9 139 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 SLC25A46Q96AG3 418 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 MS4A6AQ9H2W1 248 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 TMEM14BQ9NUH8 114 aa7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
SNRNP200-207ENST00000493271 TRAV18A0A075B6X5 111 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 IGHV4-28A0A0C4DH34 117 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 A0A1W2PS18 150 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 PRSS29PA6NIE9 313 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 I3L2K1 104 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 TMEM127O75204 238 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 PGLYRP1O75594 196 aaPredicted RBP7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 KRASP01116 189 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF182P17025 639 aaPredicted RBP7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 NPBWR1P48145 328 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 SPCS2Q15005 226 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 Q6ZTC4 211 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 TRPT1Q86TN4 253 aaKnown RBP7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 CROCCP3Q8IVE0 287 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 GRAMD2BQ96HH9 432 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF414Q96IQ9 312 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 DIABLOQ9NR28 239 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 TXNL4BQ9NX01 149 aaKnown RBP7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 ABCA13Q86UQ4 5058 aa7.98□□□□□ -1.13
SNRNP200-207ENST00000493271 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 SCGB2A1O75556 95 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 MT-CO2P00403 227 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 RLN1P04808 185 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 RBMY1A1P0DJD3 496 aaKnown RBP7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 RBMY1CP0DJD4 496 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 S100GP29377 79 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 LPAR6P43657 344 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 RBMY1FQ15415 496 aaKnown RBP7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 LGALS9BQ3B8N2 356 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 LEMD1Q68G75 181 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 DHRS11Q6UWP2 260 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 TOMM20LQ6UXN7 152 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 FCAMRQ8WWV6 532 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 S100ZQ8WXG8 99 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 MOB3AQ96BX8 217 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 MISP3Q96FF7 219 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 NDUFAF3Q9BU61 184 aa7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 WDR12Q9GZL7 423 aaKnown RBP7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 CCDC59Q9P031 241 aaKnown RBP7.97□□□□□ -1.13
SNRNP200-207ENST00000493271 DEFB131BA0A096LNP1 70 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 SMIM30A4D0T7 59 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 CORTO00230 105 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 PTHLHP12272 177 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 NPY1RP25929 384 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 G6PCP35575 357 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 EIF2B2P49770 351 aaKnown RBP7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 VBP1P61758 197 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 NCS1P62166 190 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 ERHP84090 104 aaKnown RBP7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 PRCDQ00LT1 54 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 SOHLH1Q5JUK2 328 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 DYNC2LI1Q8TCX1 351 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 C1QTNF4Q9BXJ3 329 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 AUNIPQ9H7T9 357 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 IFT46Q9NQC8 304 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 EHFQ9NZC4 300 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 RABAC1Q9UI14 185 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 TBC1D24Q9ULP9 559 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 SSR3Q9UNL2 185 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 NSG2Q9Y328 171 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 X6R8D5 127 aa7.96□□□□□ -1.14
SNRNP200-207ENST00000493271 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms