RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OR1L6Q8NGR2 347 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 DYNLRB2Q8TF09 96 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 SCARB1Q8WTV0 552 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 CACNG8Q8WXS5 425 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 TMEM190Q8WZ59 177 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 PRRT1Q99946 306 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 C5orf66Q9H5L9 145 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 COPZ2Q9P299 210 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 SCP2D1Q9UJQ7 156 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 OR51B2Q9Y5P1 312 aa7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-210ENST00000490099 ZNF320A2RRD8 509 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 C15orf61A6NNL5 157 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 K7EMT4 169 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 CYB5BO43169 146 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 TGOLN2O43493 480 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 SNAPC5O75971 98 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 CTSGP08311 255 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 RPA2P15927 270 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 GPR183P32249 361 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 ADMP35318 185 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 TSPAN5P62079 268 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 PHLDA2Q53GA4 152 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 PVRIGQ6DKI7 326 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 SLC25A24Q6NUK1 477 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 PLET1Q6UQ28 207 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 TBC1D26Q86UD7 250 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 SLC38A6Q8IZM9 456 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 OR2C3Q8N628 320 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 ZNF114Q8NC26 417 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 OR4C16Q8NGL9 310 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 OR1P1Q8NH06 330 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 ENKURQ8TC29 256 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 BSCL2Q96G97 398 aaPredicted RBP7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 PLEKHA3Q9HB20 300 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 MCUBQ9NWR8 336 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 NSG2Q9Y328 171 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 UFC1Q9Y3C8 167 aa7.27□□□□□ -1.25
TMEM39A-210ENST00000490099 LINC00854A0A1B0GVQ3 168 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 INS-IGF2F8WCM5 200 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 I3L2K1 104 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 M0QYG6 137 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 NDUFA4O00483 81 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 IFITM3Q01628 133 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 GUCA2BQ16661 112 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 ANKRD55Q3KP44 614 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 ZNF486Q96H40 463 aaPredicted RBP7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 TMEM56Q96MV1 263 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 SCGB3A2Q96PL1 93 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 FAM110AQ9BQ89 295 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 WFDC10AQ9H1F0 79 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 TBC1D24Q9ULP9 559 aa7.26□□□□□ -1.25
TMEM39A-210ENST00000490099 A0A0B4J293 547 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 LCE6AA0A183 80 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 C15orf62A8K5M9 175 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 TSPAN4O14817 238 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 PLA2G10O15496 165 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 S100GP29377 79 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 HSPE1P61604 102 aaKnown RBP7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 PRCDQ00LT1 54 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 RBMS2Q15434 407 aaKnown RBP7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 SCGB2B2Q4G0G5 96 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 BTNL8Q6UX41 500 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 SLC16A13Q7RTY0 426 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 OR51S1Q8NGJ8 323 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 TXN2Q99757 166 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 SPAG8Q99932 426 aaPredicted RBP7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 SLC25A21Q9BQT8 299 aaPredicted RBP7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 SRD5A3Q9H8P0 318 aa7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 DAZ1Q9NQZ3 744 aaKnown RBP7.25□□□□□ -1.25
TMEM39A-210ENST00000490099 IGHV3-35A0A0C4DH35 117 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 OR2T8A6NH00 312 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 SCAF4O95104 1147 aaKnown RBP7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 IGKV1-5P01602 117 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 SURF2Q15527 256 aaPredicted RBP7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 TRIM16LQ309B1 348 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 AARDQ4LEZ3 155 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 H2BFWTQ7Z2G1 175 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 OR4D10Q8NGI6 311 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 OR52B4Q8NGK2 314 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 TERB2Q8NHR7 220 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 MRGPRFQ96AM1 343 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 OR10C1Q96KK4 312 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 HINT2Q9BX68 163 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 RETNQ9HD89 108 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 GAR1Q9NY12 217 aaKnown RBP7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 SMPXQ9UHP9 88 aa7.24□□□□□ -1.25
TMEM39A-210ENST00000490099 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 NDUFB6O95139 128 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 UCP1P25874 307 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 PIGPP57054 158 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 FAM90A2PQ658T7 463 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 FAAP20Q6NZ36 180 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 DUSP18Q8NEJ0 188 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms