RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GABARAPH6UMI1 98 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 ST8SIA3O43173 380 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 IFNA17P01571 189 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 CD74P04233 296 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 CTSDP07339 412 aaPredicted RBP8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 P0C879 139 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 ETV6P41212 452 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 AKR1C2P52895 323 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 TAS2R19P59542 299 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 FAAP20Q6NZ36 180 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 ZNF114Q8NC26 417 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 MARCH1Q8TCQ1 289 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 TXN2Q99757 166 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 OVOL2Q9BRP0 275 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 NXF2Q9GZY0 626 aaKnown RBP8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 CSMD3Q7Z407 3707 aa8.88□□□□□ -0.99
CCHCR1-215ENST00000488920 IGHV7-4-1A0A0J9YVY3 117 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 CHEK1O14757 476 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 GNG7O60262 68 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 ATG12O94817 140 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 FCGR2BP31994 310 aaPredicted RBP8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 SNCAP37840 140 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 CLVS1Q8IUQ0 354 aaPredicted RBP8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 SLC35G3Q8N808 338 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 CCDC71LQ8N9Z2 235 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 TMEM116Q8NCL8 245 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 RNF2Q99496 336 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 RHPN1-AS1Q9BWJ2 59 aa8.87□□□□□ -0.99
CCHCR1-215ENST00000488920 IGHV3OR16-13A0A075B7E8 117 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 TRAV14DV4A0A0A6YYC5 116 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 IGHV3-74A0A0B4J1X5 117 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 A0A0G2JRQ6 117 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 OR4C46A6NHA9 309 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 TFPI2P48307 235 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 DUSP18Q8NEJ0 188 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 RNASE11Q8TAA1 199 aaKnown RBP8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 RRNAD1Q96FB5 475 aaKnown RBP8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 OR10C1Q96KK4 312 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 RTBDNQ9BSG5 229 aaPredicted RBP8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 PDCD10Q9BUL8 212 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 SACSQ9NZJ4 4579 aa8.86□□□□□ -0.99
CCHCR1-215ENST00000488920 IGKV3-7A0A075B6H7 116 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 TEX13DA0A0J9YY54 714 aaPredicted RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 RNASE2P10153 161 aaKnown RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 RPL35AP18077 110 aaKnown RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 UCP1P25874 307 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 NPBWR1P48145 328 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 HOXA1P49639 335 aaPredicted RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 SUB1P53999 127 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 APOC4P55056 127 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 MRPS10P82664 201 aaKnown RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 SSBP1Q04837 148 aaKnown RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 MEF2DQ14814 521 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 MLANAQ16655 118 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 TOMM20LQ6UXN7 152 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 Q6ZRM9 215 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 APRG1Q8IVJ8 170 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 GBGT1Q8N5D6 347 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 DIRAS2Q96HU8 199 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 ENY2Q9NPA8 101 aa8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 C14orf166Q9Y224 244 aaKnown RBP8.85□□□□□ -0.99
CCHCR1-215ENST00000488920 IGHV3-66A0A0C4DH42 116 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 DISC1C4P0D8 188 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 INS-IGF2F8WCM5 200 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 SPRY2O43597 315 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 CDS2O95674 445 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 TMEM50AO95807 157 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 APOHP02749 345 aaPredicted RBP8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 OR5AC1P0C628 307 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 IL18Q14116 193 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 PVRIGQ6DKI7 326 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 GLYATL2Q8WU03 294 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 RAB2BQ8WUD1 216 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 SMIM4Q8WVI0 70 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 TMEM222Q9H0R3 208 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 NAA60Q9H7X0 242 aa8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 MRPL36Q9P0J6 103 aaKnown RBP8.84□□□□□ -0.99
CCHCR1-215ENST00000488920 UBE2CO00762 179 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 B3GALNT1O75752 331 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 AKAIN1P0CW23 69 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 TMBIM6P55061 237 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 ZNF124Q15973 351 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 DEFB135Q30KP9 77 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 FAM90A2PQ658T7 463 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 Q6ZWC4 215 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 TCF24Q7RTU0 167 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 WFDC3Q8IUB2 231 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 SELENOHQ8IZQ5 122 aaKnown RBP8.83□□□□□ -1
CCHCR1-215ENST00000488920 LILRB2Q8N423 598 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 STPG3Q8N7X2 389 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 OR4C16Q8NGL9 310 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 LHFPL5Q8TAF8 219 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 ST8SIA2Q92186 375 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 LYSTQ99698 3801 aa8.83□□□□□ -1
CCHCR1-215ENST00000488920 GINS3Q9BRX5 216 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms