RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 ARF6P62330 175 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 LCN2P80188 198 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-230ENST00000488543 Q8N7P7 452 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 OR10G4Q8NGN3 311 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 OR10G7Q8NGN6 311 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 CIB3Q96Q77 187 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-230ENST00000488543 FOXA2Q9Y261 457 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-230ENST00000488543 C15orf62A8K5M9 175 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 SEC14L6B5MCN3 397 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 PHOX2AO14813 284 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 PAGE4O60829 102 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 LIPFP07098 398 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM177Q53S58 311 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 OR51G1Q8NGK1 321 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 OR4X1Q8NH49 305 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 TNFRSF14Q92956 283 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 PARLQ9H300 379 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 LPAR2Q9HBW0 351 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM14BQ9NUH8 114 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 TCF19Q9Y242 345 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 ZNF469Q96JG9 3925 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-230ENST00000488543 LOC105371242A0A075B767 164 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 IGHV4-61A0A0C4DH41 118 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 UPK2O00526 184 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 APOA2P02652 100 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 MYOD1P15172 320 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 RPL23P62829 140 aaKnown RBP9.81□□□□□ -0.84
HDAC6-230ENST00000488543 HLA-DRB5Q30154 266 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 C10orf105Q8TEF2 133 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 CLEC7AQ9BXN2 247 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 PRDM13Q9H4Q3 707 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 ONECUT1Q9UBC0 465 aa9.81□□□□□ -0.84
HDAC6-230ENST00000488543 RND2P52198 227 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 SERF2P84101 59 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 TGIF2LXQ8IUE1 241 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-230ENST00000488543 RAB24Q969Q5 203 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 PCGF1Q9BSM1 259 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 DERL1Q9BUN8 251 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 UNC79Q9P2D8 2635 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 CCDC168Q8NDH2 2452 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 A0A1W2PPQ1 181 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-230ENST00000488543 NPPCP23582 126 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 CLEC2AQ6UVW9 174 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 PDPNQ86YL7 162 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 BEND2Q8NDZ0 799 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 NPCDR1Q9BY65 106 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
HDAC6-230ENST00000488543 ABCA2Q9BZC7 2435 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 SMCO3A2RU48 225 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 B4DEV8 164 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 HNF1AP20823 631 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 COX7A1P24310 79 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 IL3RAP26951 378 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 CHRNA7P36544 502 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 PRRX1P54821 245 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 BSXQ3C1V8 233 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 OR4P4Q8NGL7 312 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 HIST1H2BLQ99880 126 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 PARD6GQ9BYG4 376 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-230ENST00000488543 BET1LQ9NYM9 111 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 DMRT1Q9Y5R6 373 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 BUB1B-PAK6H3BSN5 160 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 IFNA1P01562 189 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 HSPE1P61604 102 aaKnown RBP9.79□□□□□ -0.84
HDAC6-230ENST00000488543 RELQ04864 619 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-230ENST00000488543 PNRC1Q12796 327 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM170AQ8WVE7 144 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 PACRGQ96M98 296 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-230ENST00000488543 HARBI1Q96MB7 349 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 PIMREGQ9BSJ6 248 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM147Q9BVK8 224 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 NAT8Q9UHE5 227 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 WASHC3Q9Y3C0 194 aa9.79□□□□□ -0.84
HDAC6-230ENST00000488543 A0A1B0GUS0 222 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 VWC2LB2RUY7 222 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 LY6LH3BQJ8 138 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 M0R1W7 72 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 KBTBD11O94819 623 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 IGLV2-23P01705 113 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 GALR1P47211 349 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 ATP5G3P48201 142 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PSMB3P49720 205 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 LDLRAD2Q5SZI1 272 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 HCP5Q6MZN7 132 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 LURAP1LQ8IV03 231 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PNKDQ8N490 385 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 OR10P1Q8NGE3 313 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
HDAC6-230ENST00000488543 FLYWCH2Q96CP2 140 aaKnown RBP9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PRNDQ9UKY0 176 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 OR51B2Q9Y5P1 312 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PDZD2O15018 2839 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 CTXND1A0A1B0GTU2 59 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PFN1P07737 140 aaKnown RBP9.78□□□□□ -0.84
HDAC6-230ENST00000488543 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms