RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 LPCAT4Q643R3 524 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 ZNF660Q6AZW8 331 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 C10orf111Q8N326 155 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 TCAIMQ8N3R3 496 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 CDRT4Q8N9R6 151 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 OR8G5Q8NG78 346 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 OR13D1Q8NGV5 346 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 OR11H2Q8NH07 326 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 ITFG2Q969R8 447 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 PPP1R14BQ96C90 147 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 CHMP6Q96FZ7 201 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 SERPINI1Q99574 410 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 NAPGQ99747 312 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 AGMATQ9BSE5 352 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 DPH3P1Q9H4G8 78 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 TUBG2Q9NRH3 451 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 TMEM38BQ9NVV0 291 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 USE1Q9NZ43 259 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 AHSPQ9NZD4 102 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 RRP15Q9Y3B9 282 aaKnown RBP1.83□□□□□ -2.12
ITGB1-214ENST00000488427 MINOS1-NBL1R4GNA1 71 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 NEBP20929 6669 aa1.83□□□□□ -2.12
ITGB1-214ENST00000488427 GMNCA6NCL1 334 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 FTCDNL1E5RQL4 147 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 CSTAP01040 98 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 CAV3P56539 151 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 MTPNP58546 118 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 GRB2P62993 217 aaKnown RBP1.82□□□□□ -2.12
ITGB1-214ENST00000488427 SPCS2Q15005 226 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 OR2T2Q6IF00 324 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 Q6ZRU5 148 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 FA2HQ7L5A8 372 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 LRRC18Q8N456 261 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 OR11H6Q8NGC7 330 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 OR8A1Q8NGG7 326 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 OR4A5Q8NH83 315 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 ZNRF2Q8NHG8 242 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 KCTD7Q96MP8 289 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 CCDC115Q96NT0 180 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 IL22Q9GZX6 179 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 IQCGQ9H095 443 aaKnown RBP1.82□□□□□ -2.12
ITGB1-214ENST00000488427 TMEM100Q9NV29 134 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 CFAP45Q9UL16 551 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 ZNF443Q9Y2A4 671 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-214ENST00000488427 ENPP4Q9Y6X5 453 aa1.82□□□□□ -2.12
ITGB1-214ENST00000488427 hCG_1818297A0A087WSY0 165 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 GGT3PA6NGU5 568 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 H0YIV9 168 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 LY6LH3BQJ8 138 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 PSCAO43653 123 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 CDK1P06493 297 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 IL3P08700 152 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 OR5AC1P0C628 307 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 CCL3L1P16619 93 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 TAC1P20366 129 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 RPL37AP61513 92 aaKnown RBP1.81□□□□□ -2.12
ITGB1-214ENST00000488427 TPBGQ13641 420 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 C5orf64Q2M2E5 130 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 RPEL1Q2QD12 228 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 ZNF826PQ6ZT77 177 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 COMMD6Q7Z4G1 85 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 SLC7A5P1Q8MH63 180 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 DYNLRB2Q8TF09 96 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 SLC7A6Q92536 515 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 C12orf43Q96C57 262 aaKnown RBP1.81□□□□□ -2.12
ITGB1-214ENST00000488427 ANP32EQ9BTT0 268 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 KIFC1Q9BW19 673 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 HAUS4Q9H6D7 363 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 ABCB9Q9NP78 766 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 C19orf12Q9NSK7 152 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 HHLA2Q9UM44 414 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 ACOT9Q9Y305 439 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 NDUFAF1Q9Y375 327 aa1.81□□□□□ -2.12
ITGB1-214ENST00000488427 MACF1Q9UPN3 7388 aaKnown RBP1.81□□□□□ -2.12
ITGB1-214ENST00000488427 TRAV8-4A0A0B4J246 113 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 IQCF6A8MYZ5 107 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 RGS5O15539 181 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 AHSA1O95433 338 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 CXorf1O96002 111 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 SERPINA1P01009 418 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 P01737 135 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 C1QBP02746 253 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 SCTP09683 121 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 IFI6P09912 130 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 MLNP12872 115 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 HTR2BP41595 481 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 RPL31P62899 125 aaKnown RBP1.8□□□□□ -2.12
ITGB1-214ENST00000488427 RPL18AQ02543 176 aaKnown RBP1.8□□□□□ -2.12
ITGB1-214ENST00000488427 CDK5R1Q15078 307 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 OR8G1Q15617 311 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 LGALSLQ3ZCW2 172 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-214ENST00000488427 C1orf140Q5VVS0 124 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 OR4D6Q8NGJ1 314 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 OR5H2Q8NGV7 314 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 RNF170Q96K19 258 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 FAM19A4Q96LR4 140 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 NAP1L5Q96NT1 182 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-214ENST00000488427 WFDC6Q9BQY6 131 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 OPTCQ9UBM4 332 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 MRM2Q9UI43 246 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms