RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 WNT10AQ9GZT5 417 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 DMRT1Q9Y5R6 373 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 ATP6V0E1O15342 81 aa22.76■■□□□ 1.23
VEGFA-211ENST00000476772 NMBP08949 121 aa22.76■■□□□ 1.23
VEGFA-211ENST00000476772 FAM157CP0CG43 387 aa22.76■■□□□ 1.23
VEGFA-211ENST00000476772 C16orf82Q7Z2V1 217 aa22.76■■□□□ 1.23
VEGFA-211ENST00000476772 LFNGQ8NES3 379 aa22.76■■□□□ 1.23
VEGFA-211ENST00000476772 MISP3Q96FF7 219 aa22.76■■□□□ 1.23
VEGFA-211ENST00000476772 LINC01548A6NM66 108 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 OPRK1P41145 380 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 SULT1A2P50226 295 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 BTNL8Q6UX41 500 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 TMEM182Q6ZP80 229 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-211ENST00000476772 SLC16A13Q7RTY0 426 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 OR5R1Q8NH85 324 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 SGMS2Q8NHU3 365 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 RNF141Q8WVD5 230 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 FNDC4Q9H6D8 234 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-211ENST00000476772 NPVFQ9HCQ7 196 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 NOTCH2Q04721 2471 aa22.75■■□□□ 1.23
VEGFA-211ENST00000476772 FNDC10F2Z333 226 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 CRYGCP07315 174 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 PRDM13Q9H4Q3 707 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 TNFRSF19Q9NS68 423 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 NPIPB5A8MRT5 1133 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 M0QZK8 103 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 GPX4P36969 197 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-211ENST00000476772 SRP14P37108 136 aaKnown RBP22.74■■□□□ 1.23
VEGFA-211ENST00000476772 AKR1C1Q04828 323 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 NPCDR1Q9BY65 106 aa22.74■■□□□ 1.23
VEGFA-211ENST00000476772 TLN2Q9Y4G6 2542 aa22.73■■□□□ 1.23
VEGFA-211ENST00000476772 DEFA4P12838 97 aa22.73■■□□□ 1.23
VEGFA-211ENST00000476772 GAMTQ14353 236 aa22.73■■□□□ 1.23
VEGFA-211ENST00000476772 C9orf152Q5JTZ5 239 aa22.73■■□□□ 1.23
VEGFA-211ENST00000476772 TTC9CQ8N5M4 171 aa22.73■■□□□ 1.23
VEGFA-211ENST00000476772 CACNG8Q8WXS5 425 aa22.73■■□□□ 1.23
VEGFA-211ENST00000476772 PSMG3Q9BT73 122 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-211ENST00000476772 BTBD17A6NE02 478 aa22.72■■□□□ 1.23
VEGFA-211ENST00000476772 OR2T6Q8NHC8 308 aa22.72■■□□□ 1.23
VEGFA-211ENST00000476772 ACANP16112 2415 aa22.72■■□□□ 1.23
VEGFA-211ENST00000476772 CORTO00230 105 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 ECSCRQ19T08 205 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 SLC35E1Q96K37 410 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 SMR3AQ99954 134 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 LSM4Q9Y4Z0 139 aaKnown RBP22.71■■□□□ 1.23
VEGFA-211ENST00000476772 TIMM9Q9Y5J7 89 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 HOXA3O43365 443 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-211ENST00000476772 IGHV3-48P01763 117 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 PRH1P02810 166 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 MGST2Q99735 147 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 VPREB3Q9UKI3 123 aa22.71■■□□□ 1.23
VEGFA-211ENST00000476772 ZNF705EA8MWA4 302 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-211ENST00000476772 MPDU1O75352 247 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 BLCAPP62952 87 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 TEPPQ6URK8 271 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 UNQ5815/PRO19632Q6UWF5 114 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 CENPVQ7Z7K6 275 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-211ENST00000476772 SIGLECL1Q8N7X8 197 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 OR5T1Q8NG75 326 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 LRRC20Q8TCA0 184 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 CXorf58Q96LI9 332 aa22.7■■□□□ 1.22
VEGFA-211ENST00000476772 TMEM144Q7Z5S9 345 aa22.69■■□□□ 1.22
VEGFA-211ENST00000476772 OR1L6Q8NGR2 347 aa22.69■■□□□ 1.22
VEGFA-211ENST00000476772 ACY3Q96HD9 319 aa22.69■■□□□ 1.22
VEGFA-211ENST00000476772 TMUB1Q9BVT8 246 aa22.69■■□□□ 1.22
VEGFA-211ENST00000476772 MRPL36Q9P0J6 103 aaKnown RBP22.69■■□□□ 1.22
VEGFA-211ENST00000476772 IGHV3-21A0A0B4J1V1 117 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 MT-CO2P00403 227 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 ZNF709Q8N972 641 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 G3V318 75 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 ETFRF1Q6IPR1 90 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 SLC7A5P1Q8MH63 180 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 FANCD2OSQ96PS1 177 aa22.68■■□□□ 1.22
VEGFA-211ENST00000476772 UMAD1C9J7I0 102 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 C17orf112F2Z3M2 114 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 IGHG2P01859 326 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 HNF1AP20823 631 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 FHITP49789 147 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 SERF2P84101 59 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 NDUFA5Q16718 116 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 AKR1C8PQ5T2L2 129 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 FAM110DQ8TAY7 271 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-211ENST00000476772 GGTLC1Q9BX51 225 aa22.67■■□□□ 1.22
VEGFA-211ENST00000476772 ANK3Q12955 4377 aaKnown RBP22.66■■□□□ 1.22
VEGFA-211ENST00000476772 IGLV11-55A0A075B6I3 123 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 IGKV1OR2-108A0A075B7D4 117 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 I3L2K1 104 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 CAMLGP49069 296 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 RAB5CP51148 216 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 ELLP55199 621 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-211ENST00000476772 Q6ZS46 218 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 SLC35E3Q7Z769 313 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 VSIRQ9H7M9 311 aa22.66■■□□□ 1.22
VEGFA-211ENST00000476772 AGPAT2O15120 278 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 AKIRIN2Q53H80 203 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 ACSM6Q6P461 480 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 NPIPB3Q92617 1050 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 SAT2Q96F10 170 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-211ENST00000476772 TMEM68Q96MH6 324 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 OTOGQ6ZRI0 2925 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms