RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 IZUMO1RA6ND01 250 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 DEFB125Q8N687 156 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 RBPMSQ93062 196 aaKnown RBP10.55□□□□□ -0.72
ATG9A-220ENST00000475339 EEF1AKMT3Q96AZ1 226 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
ATG9A-220ENST00000475339 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
ATG9A-220ENST00000475339 IGLV11-55A0A075B6I3 123 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 LINC00854A0A1B0GVQ3 168 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 NAP1L6A6NFF2 107 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 DBX1A6NMT0 343 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 CENPXA8MT69 81 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 CDS2O95674 445 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 IFNA17P01571 189 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 CD81P60033 236 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 SRPXP78539 464 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 BAK1Q16611 211 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 TATDN3Q17R31 274 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 IZUMO4Q1ZYL8 232 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 CNPY1Q3B7I2 92 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 TMEM268Q5VZI3 342 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 FAM219AQ8IW50 185 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 CXorf58Q96LI9 332 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 WFDC10AQ9H1F0 79 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 ENY2Q9NPA8 101 aa10.54□□□□□ -0.72
ATG9A-220ENST00000475339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.53□□□□□ -0.72
ATG9A-220ENST00000475339 PIGBOS1A0A0B4J2F0 54 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 NDUFB8O95169 186 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 IGHV3-23P01764 117 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 HOXA1P49639 335 aaPredicted RBP10.53□□□□□ -0.72
ATG9A-220ENST00000475339 HSPE1P61604 102 aaKnown RBP10.53□□□□□ -0.72
ATG9A-220ENST00000475339 PRCDQ00LT1 54 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 RBMS2Q15434 407 aaKnown RBP10.53□□□□□ -0.72
ATG9A-220ENST00000475339 LCN12Q6JVE5 192 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 SLC25A24Q6NUK1 477 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 OR1L6Q8NGR2 347 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 GLYATL2Q8WU03 294 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 TMEM230Q96A57 120 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 GALNT14Q96FL9 552 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 FANCD2OSQ96PS1 177 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 NEURL2Q9BR09 285 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 SRD5A3Q9H8P0 318 aa10.53□□□□□ -0.72
ATG9A-220ENST00000475339 F11RQ9Y624 299 aaKnown RBP10.53□□□□□ -0.72
ATG9A-220ENST00000475339 PKD1P98161 4303 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 A0A0B4J293 547 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 A6NHS1 94 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 P0C879 139 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 IL7P13232 177 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 VAMP1P23763 118 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
ATG9A-220ENST00000475339 SPINK9Q5DT21 86 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 SELENOHQ8IZQ5 122 aaKnown RBP10.52□□□□□ -0.73
ATG9A-220ENST00000475339 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 PHLDA1Q8WV24 401 aaPredicted RBP10.52□□□□□ -0.73
ATG9A-220ENST00000475339 IL22RA2Q969J5 263 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 C7orf50Q9BRJ6 194 aaKnown RBP10.52□□□□□ -0.73
ATG9A-220ENST00000475339 S4R3C0 116 aa10.52□□□□□ -0.73
ATG9A-220ENST00000475339 TRBV7-1A0A0A6YYK4 115 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 A0A0G2JRQ6 117 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 MFSD2BA6NFX1 497 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 PPP5D1E7EU14 171 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 BMPR1BO00238 502 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 ST8SIA3O43173 380 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 CD7P09564 240 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 ARL3P36405 182 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 CCR6P51684 374 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 TMEM187Q14656 261 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 TMEM128Q5BJH2 165 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 LYG2Q86SG7 212 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 LGI3Q8N145 548 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 CENPSQ8N2Z9 138 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 OR9G4Q8NGQ1 327 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 OR1P1Q8NH06 330 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 S100ZQ8WXG8 99 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 SDHCQ99643 169 aaPredicted RBP10.51□□□□□ -0.73
ATG9A-220ENST00000475339 BATF3Q9NR55 127 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
ATG9A-220ENST00000475339 PRR13Q9NZ81 148 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 PTTG2Q9NZH5 202 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 CACNG5Q9UF02 275 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
ATG9A-220ENST00000475339 PRSS29PA6NIE9 313 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 GGCTO75223 188 aaKnown RBP10.5□□□□□ -0.73
ATG9A-220ENST00000475339 GPR183P32249 361 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 SNCAP37840 140 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 TNFRSF9Q07011 255 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 KLF5Q13887 457 aaPredicted RBP10.5□□□□□ -0.73
ATG9A-220ENST00000475339 KLK9Q2XQG4 91 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 LINC00299Q6ZSB3 139 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 VN1R17PQ8TDU5 208 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 MISP3Q96FF7 219 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 CCDC140Q96MF4 163 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms