RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 K7EQG2 157 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 ARL6IP5O75915 188 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 KRASP01116 189 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
HDAC1-204ENST00000471488 CD1AP06126 327 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 G6PCP35575 357 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 P2RY1P47900 373 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 PPP5CP53041 499 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 GNG2P59768 71 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 KRTAP10-2P60368 255 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 RPS25P62851 125 aaKnown RBP4.88□□□□□ -1.63
HDAC1-204ENST00000471488 CLINT1Q14677 625 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 ZFP1Q6P2D0 407 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 CNIH2Q6PI25 160 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 HSD17B13Q7Z5P4 300 aaPredicted RBP4.88□□□□□ -1.63
HDAC1-204ENST00000471488 C10orf67Q8IYJ2 551 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 CSNK1G2-AS1Q8NCQ2 148 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 OR13F1Q8NGS4 319 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 FAM210BQ96KR6 192 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 METTL26Q96S19 204 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 MDFICQ9P1T7 246 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 RFNGQ9Y644 331 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 NACAE9PAV3 2078 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 A0A1W2PS18 150 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM189A5PLL7 270 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM235A6NFC5 223 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 MARCH11A6NNE9 402 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 F5H768 121 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 ATP8B1O43520 1251 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 DTYMKP23919 212 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 RANBP1P43487 201 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 NPBWR1P48145 328 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 EIF2B2P49770 351 aaKnown RBP4.87□□□□□ -1.63
HDAC1-204ENST00000471488 CCL18P55774 89 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 OR10A3P58181 314 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 SPHARQ15513 63 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 SSX1Q16384 188 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 SPINK9Q5DT21 86 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 HACD4Q5VWC8 232 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
HDAC1-204ENST00000471488 ZNF600Q6ZNG1 722 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 C8orf59Q8N0T1 100 aaPredicted RBP4.87□□□□□ -1.63
HDAC1-204ENST00000471488 GRAMD2BQ96HH9 432 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM208Q9BTX3 173 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 CCDC90BQ9GZT6 254 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 DCSTAMPQ9H295 470 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 VSIRQ9H7M9 311 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
HDAC1-204ENST00000471488 RRP15Q9Y3B9 282 aaKnown RBP4.87□□□□□ -1.63
HDAC1-204ENST00000471488 YTHDF2Q9Y5A9 579 aaKnown RBP4.87□□□□□ -1.63
HDAC1-204ENST00000471488 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 TRAV2A0A0B4J234 112 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 A0A1B0GU03 582 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 TEX48A0A1B0GUV7 120 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 LOC102723971A0A1B0GUV8 181 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 PDCD5O14737 125 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 HBE1P02100 147 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 RLN1P04808 185 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 DEFB130BP0DP73 79 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 DEFB130AP0DP74 79 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 FGF9P31371 208 aaPredicted RBP4.86□□□□□ -1.63
HDAC1-204ENST00000471488 LPAR6P43657 344 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 DEFB1P60022 68 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 HERV-K104P61576 105 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 SNRPD3P62318 126 aaKnown RBP4.86□□□□□ -1.63
HDAC1-204ENST00000471488 EIF4EBP1Q13541 118 aaPredicted RBP4.86□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM91Q6ZNR0 172 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 C15orf53Q8NAA6 179 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 OR4B1Q8NGF8 309 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 OR1P1Q8NH06 330 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 LINC00052Q96N35 136 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 ATP6V0BQ99437 205 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 TXN2Q99757 166 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 ZFAND3Q9H8U3 227 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 PSORS1C1Q9UIG5 152 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 ANXA10Q9UJ72 324 aa4.86□□□□□ -1.63
HDAC1-204ENST00000471488 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 I3L2K1 104 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 CASQ2O14958 399 aaPredicted RBP4.85□□□□□ -1.63
HDAC1-204ENST00000471488 ATP5HO75947 161 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 PPYP01298 95 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 GNAO1P09471 354 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 MYL9P24844 172 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 SNCAP37840 140 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
HDAC1-204ENST00000471488 HAMPP81172 84 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 FABP5Q01469 135 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 ARL6IP1Q15041 203 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 ZNF818PQ6ZRF7 136 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 Q6ZS49 121 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 PQLC1Q8N2U9 271 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 BEST4Q8NFU0 473 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 OR4A16Q8NH70 328 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 ZNRF2Q8NHG8 242 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 DCANP1Q8TF63 244 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 UHRF2Q96PU4 802 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 MAGT1Q9H0U3 335 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms