RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 REG1BP48304 166 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 MRPL19P49406 292 aaKnown RBP2.15□□□□□ -2.07
VPS13A-210ENST00000471439 ATP6V0D1P61421 351 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 FUT5Q11128 374 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 C5orf47Q569G3 176 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 FAM222AQ5U5X8 452 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 C5orf46Q6UWT4 87 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 MBOAT2Q6ZWT7 520 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 MSRB3Q8IXL7 192 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 YIPF7Q8N8F6 280 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 DRAXINQ8NBI3 349 aaPredicted RBP2.15□□□□□ -2.07
VPS13A-210ENST00000471439 CHST4Q8NCG5 386 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 OR5J2Q8NH18 312 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 OR5AK3PQ8NH89 298 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 OR2AE1Q8NHA4 323 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 OR5P2Q8WZ92 322 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 RDH12Q96NR8 316 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 DPY30Q9C005 99 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 OR52D1Q9H346 318 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 TMEM14BQ9NUH8 114 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 CHMP5Q9NZZ3 219 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 MARCOQ9UEW3 520 aaPredicted RBP2.15□□□□□ -2.07
VPS13A-210ENST00000471439 GUCA1BQ9UMX6 200 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 ERGIC3Q9Y282 383 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 LINC00312Q9Y6C7 94 aa2.15□□□□□ -2.07
VPS13A-210ENST00000471439 TRAV26-2A0A0B4J265 109 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 EXOC1LA0A1B0GW35 172 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 hADV38S2A0JD32 116 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 CENPBD1B2RD01 187 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 DNASE2O00115 360 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 ZNF593O00488 134 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 MFNGO00587 321 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 SIVA1O15304 175 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 CCNB2O95067 398 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 IGHV3-7P01780 117 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 APCSP02743 223 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 TPM2P07951 284 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 GUSBP08236 651 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 ANXA8P13928 327 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 DTYMKP23919 212 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 CD40LGP29965 261 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 GUCA1AP43080 201 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 HOXC5Q00444 222 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 MED21Q13503 144 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 EDDM3AQ14507 147 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 INSL4Q14641 139 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 ANXA8L1Q5VT79 327 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 UNQ5815/PRO19632Q6UWF5 114 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 FAM131AQ6UXB0 335 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 HEPN1Q6WQI6 88 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 MRPL55Q7Z7F7 128 aaKnown RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 ANGPTL5Q86XS5 388 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 CYB561A3Q8NBI2 242 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 TMEM104Q8NE00 496 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 LFNGQ8NES3 379 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 COQ8AQ8NI60 647 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 STAG3L4Q8TBR4 150 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 PTX4Q96A99 478 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 ROPN1LQ96C74 230 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 NARS2Q96I59 477 aaKnown RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 FAM103A1Q9BTL3 118 aaKnown RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 SLC2A9Q9NRM0 540 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 RCL1Q9Y2P8 373 aaKnown RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 POLR3HQ9Y535 204 aaPredicted RBP2.14□□□□□ -2.07
VPS13A-210ENST00000471439 TMEM14AQ9Y6G1 99 aa2.14□□□□□ -2.07
VPS13A-210ENST00000471439 SMIM26A0A096LP01 95 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 KBTBD11-OT1A0A1B0GTJ5 212 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 WRBO00258 174 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 RER1O15258 196 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 CCDC22O60826 627 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 HLA-AP01891 365 aaKnown RBP2.13□□□□□ -2.07
VPS13A-210ENST00000471439 RAB3AP20336 220 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 MAGEA2P43356 314 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 TMEM267Q0VDI3 215 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-210ENST00000471439 ZNF816Q0VGE8 651 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-210ENST00000471439 DGCR6Q14129 220 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 MMDQ15546 238 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 KLHL12Q53G59 568 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 AKIRIN2Q53H80 203 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 RPS27LQ71UM5 84 aaKnown RBP2.13□□□□□ -2.07
VPS13A-210ENST00000471439 TRAPPC6BQ86SZ2 158 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 C1orf158Q8N1D5 194 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 LINC00471Q8N535 108 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 ASCC1Q8N9N2 400 aaKnown RBP2.13□□□□□ -2.07
VPS13A-210ENST00000471439 BPIFCQ8NFQ6 507 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 LEAP2Q969E1 77 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 L3HYPDHQ96EM0 354 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 NRBF2Q96F24 287 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 CAMK2N2Q96S95 79 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 UQCC2Q9BRT2 126 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 CST11Q9H112 138 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 POPDC3Q9HBV1 291 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 ATPIF1Q9UII2 106 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 PUS1Q9Y606 427 aaKnown RBP eCLIP2.13□□□□□ -2.07
VPS13A-210ENST00000471439 RFNGQ9Y644 331 aa2.13□□□□□ -2.07
VPS13A-210ENST00000471439 S4R3C0 116 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms