RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TEX46H3BTG2 121 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 TSPAN15O95858 294 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 CRYGCP07315 174 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 CTRB1P17538 263 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 ELLP55199 621 aaPredicted RBP7.44□□□□□ -1.22
VPS52-216ENST00000471309 CX3CL1P78423 397 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 GAMTQ14353 236 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 CTRB2Q6GPI1 263 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 ETFRF1Q6IPR1 90 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 TMEM144Q7Z5S9 345 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 LFNGQ8NES3 379 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 SLC35E1Q96K37 410 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 RBM14Q96PK6 669 aaKnown RBP7.44□□□□□ -1.22
VPS52-216ENST00000471309 RASL11BQ9BPW5 248 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 GGTLC1Q9BX51 225 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 RPRMQ9NS64 109 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 MOB4Q9Y3A3 225 aa7.44□□□□□ -1.22
VPS52-216ENST00000471309 IGHV7-81A0A0B4J1V7 117 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 TRAV1-1A0A0B4J248 108 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 ANKRD34BA5PLL1 514 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 NPIPB5A8MRT5 1133 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 HBE1P02100 147 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 H2AFB1P0C5Y9 115 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 RPL29P47914 159 aaKnown RBP7.43□□□□□ -1.22
VPS52-216ENST00000471309 MFAP2P55001 183 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 RAB2AP61019 212 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 NDPQ00604 133 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 FFAR4Q5NUL3 377 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 ASPHD1Q5U4P2 390 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 CYB5R2Q6BCY4 276 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 C9orf139Q6ZV77 190 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 C5orf56Q8N8D9 126 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 WFDC11Q8NEX6 87 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
VPS52-216ENST00000471309 SSX3Q99909 188 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 SLC25A33Q9BSK2 321 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
VPS52-216ENST00000471309 VSIRQ9H7M9 311 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 DMRT1Q9Y5R6 373 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
VPS52-216ENST00000471309 A6NDX4 124 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 I3L521 148 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 M0QZK8 103 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 AGPAT2O15120 278 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 APELAP0DMC3 54 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 M6PRP20645 277 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 PRR20EP86478 221 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 PRR20CP86479 221 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 PRR20DP86480 221 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 PRR20BP86481 221 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 PRR20AP86496 221 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 ZNF726P1Q15940 193 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 ACOT6Q3I5F7 207 aaPredicted RBP7.42□□□□□ -1.22
VPS52-216ENST00000471309 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 C16orf82Q7Z2V1 217 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 TTC9CQ8N5M4 171 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 STPG3Q8N7X2 389 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 THAP8Q8NA92 274 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 OR10G4Q8NGN3 311 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 OR10G9Q8NGN4 311 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 OR10G7Q8NGN6 311 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 NANPQ8TBE9 248 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 C22orf15Q8WYQ4 148 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 MISP3Q96FF7 219 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 HSPB9Q9BQS6 159 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 FAM103A1Q9BTL3 118 aaKnown RBP7.42□□□□□ -1.22
VPS52-216ENST00000471309 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 PXMP4Q9Y6I8 212 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 TNCP24821 2201 aa7.42□□□□□ -1.22
VPS52-216ENST00000471309 CENPEQ02224 2701 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 IGKV1OR2-108A0A075B7D4 117 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 MAP1LC3B2A6NCE7 125 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 SEC14L6B5MCN3 397 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 KRBOX1C9JBD0 128 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 H3BUX3 64 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 CYB5BO43169 146 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 YIF1AO95070 293 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 DEFA4P12838 97 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 ZP3P21754 424 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 B2MP61769 119 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 MIC13Q5XKP0 118 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 C19orf35Q6ZS72 473 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
VPS52-216ENST00000471309 TEX29Q8N6K0 151 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 OR2T6Q8NHC8 308 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 SGMS2Q8NHU3 365 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 ACY3Q96HD9 319 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 FAM210AQ96ND0 272 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 ACTR3CQ9C0K3 210 aaPredicted RBP7.41□□□□□ -1.22
VPS52-216ENST00000471309 MAP1LC3BQ9GZQ8 125 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 WNT10AQ9GZT5 417 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 SLC39A9Q9NUM3 307 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 SLC45A2Q9UMX9 530 aa7.41□□□□□ -1.22
VPS52-216ENST00000471309 SOX21Q9Y651 276 aaPredicted RBP7.41□□□□□ -1.22
VPS52-216ENST00000471309 PRRC2AP48634 2157 aaKnown RBP7.41□□□□□ -1.22
VPS52-216ENST00000471309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.41□□□□□ -1.228e-10■■■□□ 18.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms