RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 FOPNLQ96NB1 174 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 LYSMD1Q96S90 227 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ALX4Q9H161 411 aaPredicted RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 OR52D1Q9H346 318 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 EFCAB1Q9HAE3 211 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 POPDC3Q9HBV1 291 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 LINC00527Q9UJ94 153 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 RPL26L1Q9UNX3 145 aaKnown RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 SLC35A3Q9Y2D2 325 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CARHSP1Q9Y2V2 147 aaKnown RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 KIF25-AS1Q9Y6Z4 181 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 COL5A1P20908 1838 aaPredicted RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CNTRLQ7Z7A1 2325 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 SEC16AO15027 2179 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV1OR15-9A0A0B4J2B8 117 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 A0A1B0GVX0 72 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR5H1A6NKK0 313 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 H7C1C5 153 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 FXYD1O00168 92 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 HMGB3O15347 200 aaKnown RBP2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF861PO60384 105 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 PPBPP02775 128 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ATP5G1P05496 136 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF806P0C7X5 589 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR12D1P0DN82 309 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF708P17019 499 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 CDC42P60953 191 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 LCN6P62502 163 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 HOXC5Q00444 222 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 NNATQ16517 81 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAM201AQ5SY85 155 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 TSPO2Q5TGU0 170 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 GLYATQ6IB77 296 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 RPL13AP3Q6NVV1 102 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 GUSBP11Q6P575 273 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 GOLT1AQ6ZVE7 132 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 COMMD6Q7Z4G1 85 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ATP5L2Q7Z4Y8 100 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 LINC00596Q86U02 117 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 C11orf53Q8IXP5 236 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 MKXQ8IYA7 352 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZCCHC24Q8N2G6 241 aaKnown RBP2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 SLC25A45Q8N413 288 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM86BQ8N661 226 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR11H6Q8NGC7 330 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR4K5Q8NGD3 323 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR5D16Q8NGK9 328 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR51H1Q8NH63 302 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 LCN9Q8WX39 176 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 DNAJC9Q8WXX5 260 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF799Q96GE5 643 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF285Q96NJ3 590 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 PRSS27Q9BQR3 290 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 WFDC6Q9BQY6 131 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 RSPO3Q9BXY4 272 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 SAMD10Q9BYL1 202 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 VCXQ9H320 206 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 PARP11Q9NR21 331 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 LYRM2Q9NU23 88 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 UQCC1Q9NVA1 299 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 IDI2-AS1Q9NZ38 188 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 TP53TG3Q9ULZ0 132 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 WASHC3Q9Y3C0 194 aa2.52□□□□□ -2.01
HMGB1P25-201ENST00000468402 MED13Q9UHV7 2174 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 PTPRBP23467 1997 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF318Q5VUA4 2279 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGHV2-26A0A0B4J1V2 119 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 WI2-2373I1.2A0A1W2PRP0 233 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 hADV38S2A0JD32 116 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGSF23A1L1A6 192 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 KNCNA6PVL3 124 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 C17orf51A8MQB3 221 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 B4DEV8 164 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAAHO00519 579 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 GNGT2O14610 69 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 GCM2O75603 506 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 CDRT1O95170 752 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 GADD45GO95257 159 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 CA2P00918 260 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 TNFP01375 233 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 CRYGDP07320 174 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SOD3P08294 240 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 FBP1P09467 338 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 ESDP10768 282 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 CPMP14384 443 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 AKR1C3P42330 323 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SSR2P43308 183 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 MAP2K4P45985 399 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF83P51522 516 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 EMP1P54849 157 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 GNG5P63218 68 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 EMX2Q04743 252 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 APOFQ13790 326 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SSX1Q16384 188 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SCGB2B2Q4G0G5 96 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAM222AQ5U5X8 452 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 LCN8Q6JVE9 175 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms