RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 HERPUD1Q15011 391 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 EBLN2Q6P2I7 272 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 GAFA1Q96PS6 74 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 TMEM191AQ9H0A3 160 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 CUL9Q8IWT3 2517 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.59
BRAT1-203ENST00000467558 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.59
BRAT1-203ENST00000467558 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.59
BRAT1-203ENST00000467558 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.59
BRAT1-203ENST00000467558 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 IGLV3-1P01715 115 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
BRAT1-203ENST00000467558 LMO1P25800 156 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 DOCK10Q96BY6 2186 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 ZNF503-AS2A6NEH8 195 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 TIMM23O14925 209 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 TGFAP01135 160 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 CYTL1Q9NRR1 136 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 ANAPC10Q9UM13 185 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 IGHV2-26A0A0B4J1V2 119 aa11.39□□□□□ -0.59
BRAT1-203ENST00000467558 PRSS1P07477 247 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 HTN1P15515 57 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 TFPI2P48307 235 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 PRR30Q53SZ7 412 aaPredicted RBP11.38□□□□□ -0.59
BRAT1-203ENST00000467558 SGK494Q96LW2 274 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 A0A0G2JLM5 398 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 PCDH15Q96QU1 1955 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 SIAH2O43255 324 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 MIR17HGQ75NE6 70 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 ACACBO00763 2458 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 GNLYP22749 145 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 CD81P60033 236 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
BRAT1-203ENST00000467558 ICAM4Q14773 271 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
BRAT1-203ENST00000467558 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 IGF2-ASQ6U949 168 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 S4R3C0 116 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 ZNF106Q9H2Y7 1883 aaKnown RBP11.37□□□□□ -0.59
BRAT1-203ENST00000467558 E7EQL1 145 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 IGLV1-44P01699 117 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 SLC25A48Q6ZT89 311 aaKnown RBP11.37□□□□□ -0.59
BRAT1-203ENST00000467558 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
BRAT1-203ENST00000467558 MAP1LC3CQ9BXW4 147 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 PRO1933Q9H354 126 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 C5orf42Q9H799 3197 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 LINC00473A8K010 186 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 ATP5G3P48201 142 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 TMEM14EPQ6UXP3 125 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 MBD3L1Q8WWY6 194 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 SLC25A33Q9BSK2 321 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 FAM215AQ9Y5M1 114 aa11.37□□□□□ -0.59
BRAT1-203ENST00000467558 IGKV1-6A0A0C4DH72 117 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 CD24P25063 80 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 GATA4P43694 442 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 TCF15Q12870 199 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 Q6ZR03 302 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 GPR183P32249 361 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 IGFL2Q6UWQ7 119 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 MRPL18Q9H0U6 180 aaKnown RBP11.36□□□□□ -0.59
BRAT1-203ENST00000467558 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 OTOGLQ3ZCN5 2332 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 TWIST1Q15672 202 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 HSPB8Q9UJY1 196 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 ITGB1BP1O14713 200 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 SPRY4Q9C004 299 aa11.36□□□□□ -0.59
BRAT1-203ENST00000467558 A0A087WWC5 75 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 SCO2A0A1W2PP80 73 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 TCRBV4S1A1TA0A5B7 111 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 PEX7O00628 323 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 GCGP01275 180 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 WT1P19544 449 aaPredicted RBP11.35□□□□□ -0.59
BRAT1-203ENST00000467558 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 ERVK11-1P61568 191 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 TREML4Q6UXN2 200 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 RNF5Q99942 180 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 DOPEY2Q9Y3R5 2298 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 ZNF98A6NK75 572 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 OOSP1A8MZH6 123 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 M0QZK8 103 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 CDC42EP3Q9UKI2 254 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 IGHV3-23P01764 117 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 MGPP08493 103 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 LYL1P12980 280 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 PRSS8Q16651 343 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 TMEM167AQ8TBQ9 72 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 NEUROG1Q92886 237 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 PGLYRP4Q96LB8 373 aa11.35□□□□□ -0.59
BRAT1-203ENST00000467558 TRBV9A0A0B4J1U6 114 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 AMY1AP04745 511 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 TAS2R60P59551 318 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 OR10W1Q8NGF6 305 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms