RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 MEF2BQ02080 365 aaPredicted RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 VAX1Q5SQQ9 334 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IBA57Q5T440 356 aaKnown RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 STAC2Q6ZMT1 411 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FNDC9Q8TBE3 224 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SRSF12Q8WXF0 261 aaKnown RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SLAMF6Q96DU3 332 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FMC1Q96HJ9 113 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HSD17B10Q99714 261 aaKnown RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SOX21Q9Y651 276 aaPredicted RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LRRK1Q38SD2 2015 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TEX50A0A1B0GTY4 177 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 MSGN1A6NI15 193 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 H7BYZ3 331 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FFAR1O14842 300 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SLC2A10O95528 541 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HSPB1P04792 205 aaKnown RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SCTP09683 121 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CISD3P0C7P0 127 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLC2P0DOY2 106 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLC3P0DOY3 106 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HINT1P49773 126 aaPredicted RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TPPP2P59282 170 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FAM201AQ5SY85 155 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 GLYATL3Q5SZD4 288 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ATP1A1-AS1Q5TC04 95 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FBXL14Q8N1E6 418 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZDHHC22Q8N966 263 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IL1F10Q8WWZ1 152 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 MAL2Q969L2 176 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LRRC61Q9BV99 259 aa4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TCF20Q9UGU0 1960 aaKnown RBP4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LAMA3Q16787 3333 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLV5-52A0A0A0MRZ9 124 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGHV2-26A0A0B4J1V2 119 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 RIIAD1A6NNX1 92 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HYPMO75409 117 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FGF6P10767 208 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CXCL12P48061 93 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LHX2P50458 406 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 GPM6AP51674 278 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SPATA45Q537H7 98 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF788Q6ZQV5 615 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 Q6ZVQ6 151 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF550Q7Z398 422 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LRP11Q86VZ4 500 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 METTL27Q8N6F8 245 aaPredicted RBP4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF709Q8N972 641 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 C5orf17Q8NAS9 161 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PRSS3P2Q8NHM4 247 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 APOBEC4Q8WW27 367 aaKnown RBP4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNRF4Q8WWF5 429 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 DERL3Q96Q80 235 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ESM1Q9NQ30 184 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 OR5V1Q9UGF6 321 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 GOLGA4Q13439 2230 aaKnown RBP4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 NUP210Q8TEM1 1887 aaPredicted RBP4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CHD7Q9P2D1 2997 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ATP6V0E1O15342 81 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PROP1O75360 226 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CD3DP04234 171 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PTHLHP12272 177 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CTSEP14091 401 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ECSCRQ19T08 205 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF260Q3ZCT1 412 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF506Q5JVG8 444 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGFL2Q6UWQ7 119 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HRCT1Q6UXD1 115 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF695Q8IW36 515 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 C1orf174Q8IYL3 243 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CLECL1Q8IZS7 167 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SLC22A18ASQ8N1D0 253 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 AP1S3Q96PC3 154 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 DEC1Q9P2X7 70 aa4.69□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 KIAA1549LQ6ZVL6 1849 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HEATR5AQ86XA9 2040 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TRPM6Q9BX84 2022 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CCDC88CQ9P219 2028 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 C1QL1O75973 258 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 IGLC1P0CG04 106 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 CSRP1P21291 193 aaKnown RBP4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PRSS3P35030 304 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 GUCA1AP43080 201 aaPredicted RBP4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HBG1P69891 147 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 HBG2P69892 147 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 ZNF92Q03936 586 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 DPTQ07507 201 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SRSF9Q13242 221 aaKnown RBP eCLIP4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 FAM120AOSQ5T036 256 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 LYRM7Q5U5X0 104 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 PVRIGQ6DKI7 326 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SLC35E4Q6ICL7 350 aa4.68□□□□□ -1.66
ALMS1-IT1-201ENST00000441587 SAXO1Q8IYX7 474 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms