RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MTFP1Q9UDX5 166 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 IGKV3-7A0A075B6H7 116 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 FAM25AB3EWG3 89 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 FAM25CB3EWG5 89 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 FAM25GB3EWG6 89 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 SPRY2O43597 315 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 GABARAPO95166 117 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 TFPI2P48307 235 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 PIGPP57054 158 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 Q6ZRM9 215 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 Q6ZWC4 215 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 LYG2Q86SG7 212 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 TMEM116Q8NCL8 245 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
CPSF4-203ENST00000430038 EXTL2Q9UBQ6 330 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 YIF1AO95070 293 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 PGAM2P15259 253 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 GPR107Q5VW38 600 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 LAMTOR1Q6IAA8 161 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 RNF183Q96D59 192 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 TXN2Q99757 166 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 OR4C46A6NHA9 309 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 CD74P04233 296 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ETV6P41212 452 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 PPP5CP53041 499 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 TNFRSF9Q07011 255 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 RNASE10Q5GAN6 216 aaKnown RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 TRAV14DV4A0A0A6YYC5 116 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 A0A1B0GU03 582 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 CTDSP2O14595 271 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 JTBO76095 146 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 TMEM50AO95807 157 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
CPSF4-203ENST00000430038 S100GP29377 79 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 BMI1P35226 326 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 APOC4P55056 127 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5AQ8N109 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 FAM24BQ8N5W8 94 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 OR13C8Q8NGS7 320 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5BQ8NHK3 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 LHFPL5Q8TAF8 219 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 GNG7O60262 68 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 ERHP84090 104 aaKnown RBP12.56□□□□□ -0.4
CPSF4-203ENST00000430038 SPCS2Q15005 226 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 MZT2AQ6P582 158 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 GALNT14Q96FL9 552 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 ZNF486Q96H40 463 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-203ENST00000430038 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-203ENST00000430038 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 UBE2CO00762 179 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 DFFBO76075 338 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 UCP1P25874 307 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 STPG3Q8N7X2 389 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 LINC00476Q8WZB0 136 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 PUS1Q9Y606 427 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPSF4-203ENST00000430038 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 BSXQ3C1V8 233 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 GLYATL2Q8WU03 294 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 RAB3DO95716 219 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 IFNA17P01571 189 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 AKR1C2P52895 323 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 CEMP1Q6PRD7 247 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-203ENST00000430038 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 CDS2O95674 445 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 TBPP20226 339 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 SNCAP37840 140 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 TRIM16LQ309B1 348 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
CPSF4-203ENST00000430038 SLC35G3Q8N808 338 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 TMEM170AQ8WVE7 144 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 AP3S1Q92572 193 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms