RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RXFP4Q8TDU9 374 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 RBPMSQ93062 196 aaKnown RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 TMEM230Q96A57 120 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 LINC00052Q96N35 136 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 URM1Q9BTM9 101 aaKnown RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 FAM107BQ9H098 131 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 SEPSECSQ9HD40 501 aaKnown RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 ERVK13-1Q9NX77 482 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 TAS2R8Q9NYW2 309 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 RRP15Q9Y3B9 282 aaKnown RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 F11RQ9Y624 299 aaKnown RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 HLA-DRB4X5D2U9 266 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 PGPEP1LA6NFU8 196 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 G3V2T6 193 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 K7EIM0 57 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 EBAG9O00559 213 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 SCGB2A1O75556 95 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 B3GALNT1O75752 331 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 NXPH4O95158 308 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 IGLV2-8P01709 118 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 DCKP27707 260 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 GNGT1P63211 74 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 TIMM50Q3ZCQ8 353 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 Q499Y3 187 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 RBM48Q5RL73 367 aaKnown RBP4.3□□□□□ -1.72
SDCBP-203ENST00000424270 THOC7Q6I9Y2 204 aaKnown RBP4.3□□□□□ -1.72
SDCBP-203ENST00000424270 ZNF600Q6ZNG1 722 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 SPATA24Q86W54 205 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 CDH26Q8IXH8 852 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 ADGRG5Q8IZF4 528 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 OR10J6PQ8NGY7 276 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 COQ8AQ8NI60 647 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 CANT1Q8WVQ1 401 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 MAFIPQ8WZ33 124 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 LSM10Q969L4 123 aaKnown RBP4.3□□□□□ -1.72
SDCBP-203ENST00000424270 TXN2Q99757 166 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 SLC35B3Q9H1N7 401 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 KCNK15Q9H427 330 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 BET1LQ9NYM9 111 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 ARL2BPQ9Y2Y0 163 aa4.3□□□□□ -1.72
SDCBP-203ENST00000424270 TRBV6-7A0A0A0MS04 114 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 FAM90A26D6RGX4 464 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 J3QRE1 110 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 SOCS1O15524 211 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 TNFSF12O43508 249 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 ADAP1O75689 374 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 C1QBP02746 253 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 TALDO1P37837 337 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 NPBWR1P48145 328 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 RPL37AP61513 92 aaKnown RBP4.29□□□□□ -1.72
SDCBP-203ENST00000424270 ERVK-16P61578 105 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 RPL30P62888 115 aaKnown RBP4.29□□□□□ -1.72
SDCBP-203ENST00000424270 PSG9Q00887 426 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 WT1-ASQ06250 92 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 SSX1Q16384 188 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 CCDC58Q4VC31 144 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 YIF1BQ5BJH7 314 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 MEDAGQ5VYS4 303 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 EBLN2Q6P2I7 272 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 TMPRSS11AQ6ZMR5 421 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 SCXQ7RTU7 201 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 TPRA1Q86W33 373 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 CADM3Q8N126 398 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 C1orf158Q8N1D5 194 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 OR1L8Q8NGR8 309 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 LGALS12Q96DT0 336 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 NRBF2Q96F24 287 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 ABHD1Q96SE0 405 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 HSD17B10Q99714 261 aaKnown RBP4.29□□□□□ -1.72
SDCBP-203ENST00000424270 SLC29A1Q99808 456 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 BLOC1S6Q9UL45 172 aa4.29□□□□□ -1.72
SDCBP-203ENST00000424270 RBMX2Q9Y388 322 aaKnown RBP4.29□□□□□ -1.72
SDCBP-203ENST00000424270 A0A075B6Q4 140 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 PNMA8CA0A1B0GUJ8 204 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 ERICH4A6NGS2 130 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 UPK2O00526 184 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 DENRO43583 198 aaKnown RBP4.28□□□□□ -1.72
SDCBP-203ENST00000424270 FKBP6O75344 327 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 SLC22A5O76082 557 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 MT-CO2P00403 227 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 PRM2P04554 102 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 CD37P11049 281 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 HOXB6P17509 224 aaKnown RBP4.28□□□□□ -1.72
SDCBP-203ENST00000424270 EVI2AP22794 236 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 ID1P41134 155 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 RASSF2P50749 326 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 RORCP51449 518 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 PPP5CP53041 499 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 PAX9P55771 341 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 DEFB1P60022 68 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 MS4A2Q01362 244 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 ACSM3Q53FZ2 586 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 LELP1Q5T871 98 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 GDF5OSQ5U4N7 250 aa4.28□□□□□ -1.72
SDCBP-203ENST00000424270 XAF1Q6GPH4 301 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms