RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RND3P61587 244 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 RELQ04864 619 aaPredicted RBP6.94□□□□□ -1.3
NUP50-206ENST00000422489 SPCS2Q15005 226 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 LHFPL1Q86WI0 220 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 SLC35G3Q8N808 338 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 CCDC71LQ8N9Z2 235 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 IL17DQ8TAD2 202 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 MARCH1Q8TCQ1 289 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 RRNAD1Q96FB5 475 aaKnown RBP6.94□□□□□ -1.3
NUP50-206ENST00000422489 ATP6V0BQ99437 205 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 ENY2Q9NPA8 101 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 DAZ1Q9NQZ3 744 aaKnown RBP6.94□□□□□ -1.3
NUP50-206ENST00000422489 SMPXQ9UHP9 88 aa6.94□□□□□ -1.3
NUP50-206ENST00000422489 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
NUP50-206ENST00000422489 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 A0A0B4J293 547 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 TEX13DA0A0J9YY54 714 aaPredicted RBP6.93□□□□□ -1.3
NUP50-206ENST00000422489 OR4C46A6NHA9 309 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 DISC1C4P0D8 188 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 F8W735 103 aaPredicted RBP6.93□□□□□ -1.3
NUP50-206ENST00000422489 GABARAPH6UMI1 98 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 TSPAN4O14817 238 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 ST8SIA3O43173 380 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 TBPP20226 339 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 ALDH3B2P48448 385 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 SUB1P53999 127 aaKnown RBP eCLIP6.93□□□□□ -1.3
NUP50-206ENST00000422489 IL18Q14116 193 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 FAAP20Q6NZ36 180 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 TMEM116Q8NCL8 245 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 DUSP18Q8NEJ0 188 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 OR13C8Q8NGS7 320 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 DIRAS2Q96HU8 199 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 TXN2Q99757 166 aa6.93□□□□□ -1.3
NUP50-206ENST00000422489 SPAG8Q99932 426 aaPredicted RBP6.93□□□□□ -1.3
NUP50-206ENST00000422489 C14orf166Q9Y224 244 aaKnown RBP6.93□□□□□ -1.3
NUP50-206ENST00000422489 TRAV14DV4A0A0A6YYC5 116 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 IGHV7-4-1A0A0J9YVY3 117 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 LCE6AA0A183 80 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 C15orf62A8K5M9 175 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 CD74P04233 296 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 RPL35AP18077 110 aaKnown RBP6.92□□□□□ -1.3
NUP50-206ENST00000422489 NPBWR1P48145 328 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 HOXA1P49639 335 aaPredicted RBP6.92□□□□□ -1.3
NUP50-206ENST00000422489 MEF2DQ14814 521 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 MLANAQ16655 118 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 WFDC3Q8IUB2 231 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 GBGT1Q8N5D6 347 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 RNF2Q99496 336 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 OVOL2Q9BRP0 275 aa6.92□□□□□ -1.3
NUP50-206ENST00000422489 NXF2Q9GZY0 626 aaKnown RBP6.92□□□□□ -1.3
NUP50-206ENST00000422489 RYR3Q15413 4870 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 STAB2Q8WWQ8 2551 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 TNCP24821 2201 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 A0A0G2JRQ6 117 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 CHEK1O14757 476 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 NOL3O60936 208 aaKnown RBP6.91□□□□□ -1.3
NUP50-206ENST00000422489 TMEM50AO95807 157 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 OR5AC1P0C628 307 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 AKAIN1P0CW23 69 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 APOC4P55056 127 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 RPL11P62913 178 aaKnown RBP6.91□□□□□ -1.3
NUP50-206ENST00000422489 MRPS10P82664 201 aaKnown RBP6.91□□□□□ -1.3
NUP50-206ENST00000422489 TOMM20LQ6UXN7 152 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 APRG1Q8IVJ8 170 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 ZNF114Q8NC26 417 aa6.91□□□□□ -1.3
NUP50-206ENST00000422489 RTBDNQ9BSG5 229 aaPredicted RBP6.91□□□□□ -1.3
NUP50-206ENST00000422489 C6orf62Q9GZU0 229 aaPredicted RBP6.91□□□□□ -1.3
NUP50-206ENST00000422489 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 SPRY2O43597 315 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 B3GALNT1O75752 331 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 APOHP02749 345 aaPredicted RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 P0C879 139 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 UCP1P25874 307 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 FCGR2BP31994 310 aaPredicted RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 TMBIM6P55061 237 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 PAFAH1B2P68402 229 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 DHODHQ02127 395 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 SSBP1Q04837 148 aaKnown RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 Q6ZRM9 215 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 TCF24Q7RTU0 167 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 SELENOHQ8IZQ5 122 aaKnown RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 RAB2BQ8WUD1 216 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 TMEM230Q96A57 120 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 GPR146Q96CH1 333 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 GALNT14Q96FL9 552 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 GINS3Q9BRX5 216 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 TMEM222Q9H0R3 208 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 NAA60Q9H7X0 242 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 HEYLQ9NQ87 328 aaPredicted RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.9□□□□□ -1.3
NUP50-206ENST00000422489 GPR132Q9UNW8 380 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 KCNIP3Q9Y2W7 256 aa6.9□□□□□ -1.3
NUP50-206ENST00000422489 PUS1Q9Y606 427 aaKnown RBP eCLIP6.9□□□□□ -1.3
NUP50-206ENST00000422489 FABP12A6NFH5 140 aa6.89□□□□□ -1.31
NUP50-206ENST00000422489 CEBPZOSA8MTT3 80 aa6.89□□□□□ -1.31
NUP50-206ENST00000422489 DNASE2O00115 360 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms