RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 EBI3Q14213 229 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 RTL8BQ17RB0 113 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 ECSCRQ19T08 205 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 NSUN5P1Q3KNT7 163 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 SCGB2B2Q4G0G5 96 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 PYDC2Q56P42 97 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 RNASE10Q5GAN6 216 aaKnown RBP3.38□□□□□ -1.87
PTPRK-209ENST00000415046 AADACL3Q5VUY0 350 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 PYHIN1Q6K0P9 492 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 C10orf99Q6UWK7 81 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 SLC35E3Q7Z769 313 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 FAM71E2Q8N5Q1 922 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 ZNF645Q8N7E2 425 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 Q8N9W7 124 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 OR51H1Q8NH63 302 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 GRPEL2Q8TAA5 225 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 SMIM4Q8WVI0 70 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 TSNAXQ99598 290 aaKnown RBP3.38□□□□□ -1.87
PTPRK-209ENST00000415046 HSPB9Q9BQS6 159 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 NXF2Q9GZY0 626 aaKnown RBP3.38□□□□□ -1.87
PTPRK-209ENST00000415046 TOLLIPQ9H0E2 274 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 C16orf95Q9H693 158 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 GSN-AS1Q9NRJ2 163 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 PLSCR3Q9NRY6 295 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 NDUFA13Q9P0J0 144 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 METTL1Q9UBP6 276 aaKnown RBP3.38□□□□□ -1.87
PTPRK-209ENST00000415046 MTFP1Q9UDX5 166 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 ZNF107Q9UII5 783 aaPredicted RBP3.38□□□□□ -1.87
PTPRK-209ENST00000415046 ANAPC10Q9UM13 185 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 PRELID3BQ9Y3B1 194 aa3.38□□□□□ -1.87
PTPRK-209ENST00000415046 IGHV4-4A0A075B6R2 117 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 LINC00854A0A1B0GVQ3 168 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 PSMB11A5LHX3 300 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 ATP6V0E1O15342 81 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 SLC22A5O76082 557 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 RAB3DO95716 219 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 IGHG2P01859 326 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 FRMD6-AS1P0C7T7 363 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 APELAP0DMC3 54 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 AREGP15514 252 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 NKX2-1P43699 371 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 TAS2R19P59542 299 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 CX3CL1P78423 397 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 MRPS10P82664 201 aaKnown RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 CATR1Q13166 79 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 PSG5Q15238 335 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 C5orf64Q2M2E5 130 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 ACTBL2Q562R1 376 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 SPANXN2Q5MJ10 180 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 ZNF57Q68EA5 555 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 ZNF660Q6AZW8 331 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 STEAP1BQ6NZ63 245 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 SIGLEC15Q6ZMC9 328 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 IDO2Q6ZQW0 420 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 ZNF818PQ6ZRF7 136 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 SSX9Q7RTT3 188 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 PDPNQ86YL7 162 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 MMD2Q8IY49 270 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 VKORC1L1Q8N0U8 176 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 TMEM229BQ8NBD8 167 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 OR5AU1Q8NGC0 362 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 OR11H4Q8NGC9 324 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 OR4D10Q8NGI6 311 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 OR4C16Q8NGL9 310 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 OR6F1Q8NGZ6 308 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 OR4S2Q8NH73 311 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 MARCH1Q8TCQ1 289 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 C15orf40Q8WUR7 153 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 GIMAP1Q8WWP7 306 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 FLYWCH2Q96CP2 140 aaKnown RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 DGCR14Q96DF8 476 aaKnown RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 ADTRPQ96IZ2 230 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 HSD17B10Q99714 261 aaKnown RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 FAM103A1Q9BTL3 118 aaKnown RBP3.37□□□□□ -1.87
PTPRK-209ENST00000415046 Q9H8V8 135 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 WSB1Q9Y6I7 421 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 V9GYH0 126 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 DNHD1Q96M86 4753 aa3.37□□□□□ -1.87
PTPRK-209ENST00000415046 IGLV7-46A0A075B6I9 117 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 IGHV7-81A0A0B4J1V7 117 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 TRAV41A0A0B4J266 112 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 TCRBV4S1A1TA0A5B7 111 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 ANKRD20A5PA0PJZ0 165 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 DISC1C4P0D8 188 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 G3V318 75 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 GPR31O00270 319 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 FCN1O00602 326 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 GSTZ1O43708 216 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-209ENST00000415046 RAMP3O60896 148 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 S1PR2O95136 353 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 NDUFA3O95167 84 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 CNIH1O95406 144 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 CA2P00918 260 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 IGLV2-23P01705 113 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 HLA-DRB1P01911 266 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 CD74P04233 296 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 AKAIN1P0CW23 69 aa3.36□□□□□ -1.87
PTPRK-209ENST00000415046 SAA1P0DJI8 122 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-209ENST00000415046 RRASP10301 218 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms