RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 TM4SF5O14894 197 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 LOXL3P58215 753 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 RELBQ01201 579 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 ASCL4Q6XD76 172 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 GOLT1BQ9Y3E0 138 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 AMY1AP04745 511 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 ZCCHC14Q8WYQ9 949 aaKnown RBP13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 TMEM191AQ9H0A3 160 aa13.65□□□□□ -0.22
PTPRN2-205ENST00000409483 NUP210Q8TEM1 1887 aaPredicted RBP13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 IGKV1D-17A0A075B6S4 117 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 GNG5P63218 68 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 MST1LQ2TV78 715 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 CBY3A6NI87 242 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 DDTP30046 118 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 TREML4Q6UXN2 200 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 WDR83OSQ9Y284 106 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BKO60814 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BJP06899 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 ZNF25P17030 456 aaPredicted RBP13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BOP23527 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BBP33778 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 MFAP4P55083 255 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BDP58876 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BCP62807 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 TWIST1Q15672 202 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST2H2BEQ16778 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BHQ93079 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BNQ99877 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HIST1H2BMQ99879 126 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 HLA-DQA1P01909 254 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 CSRP1P21291 193 aaKnown RBP13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 LY6DQ14210 128 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 RNASE6Q93091 150 aaKnown RBP13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 CHODLQ9H9P2 273 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 DCAF16Q9NXF7 216 aa13.64□□□□□ -0.23
PTPRN2-205ENST00000409483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 TRAV5A0A0B4J249 113 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 VENTXO95231 258 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 ZNF585BQ52M93 769 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 DNM1P46Q6ZS02 220 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 DPM3Q9P2X0 92 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 YTHDF2Q9Y5A9 579 aaKnown RBP13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 IGF2RP11717 2491 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 OTOGLQ3ZCN5 2332 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 TEX50A0A1B0GTY4 177 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 TMEM189A5PLL7 270 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 MT-ND6P03923 174 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 MGPP08493 103 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 KLRB1Q12918 225 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 OR5R1Q8NH85 324 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 SLC25A33Q9BSK2 321 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 LINC00587B1AMM8 73 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 CA1P00915 261 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 EFNB3Q15768 340 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 C1QL4Q86Z23 238 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 GSN-AS1Q9NRJ2 163 aa13.63□□□□□ -0.23
PTPRN2-205ENST00000409483 TMEM144Q7Z5S9 345 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 MLANAQ16655 118 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 SPANXN1Q5VSR9 72 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 CLEC2AQ6UVW9 174 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 WDR86Q86TI4 376 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 TMEM183AQ8IXX5 376 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 NEUROG1Q92886 237 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 GSX1Q9H4S2 264 aaPredicted RBP13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 NCOR2Q9Y618 2525 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 MAS1LP35410 378 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 OCC1Q8TAD7 63 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 SEPSECSQ9HD40 501 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 VPS25Q9BRG1 176 aa13.62□□□□□ -0.23
PTPRN2-205ENST00000409483 NPIPB11E5RHQ5 1161 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 FAM19A2Q8N3H0 131 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 OR4C5Q8NGB2 326 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 ATP5J2P56134 94 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 MEF2CQ06413 473 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 TMEM208Q9BTX3 173 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 BET1LQ9NYM9 111 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 A0A087WWC5 75 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 SOD3P08294 240 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 TMEM116Q8NCL8 245 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 GGTLC1Q9BX51 225 aa13.61□□□□□ -0.23
PTPRN2-205ENST00000409483 HOXA5P20719 270 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 MBNL2Q5VZF2 373 aaKnown RBP13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 HEPN1Q6WQI6 88 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 DPF1Q92782 380 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 C16orf92Q96LL3 132 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 WNT10AQ9GZT5 417 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 PRR30Q53SZ7 412 aaPredicted RBP13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 DUX4L9Q6RFH8 374 aaPredicted RBP13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 MBD3L1Q8WWY6 194 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 TUBA4BQ9H853 241 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 A0A0G2JNJ9 132 aa13.6□□□□□ -0.23
PTPRN2-205ENST00000409483 DLX1P56177 255 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms