RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 SLC25A34Q6PIV7 304 aa13.52□□□□□ -0.24
PCDHA12-201ENST00000398631 OR4D5Q8NGN0 318 aa13.52□□□□□ -0.24
PCDHA12-201ENST00000398631 DMRTA2Q96SC8 542 aa13.52□□□□□ -0.24
PCDHA12-201ENST00000398631 PI4KAP42356 2102 aa13.52□□□□□ -0.24
PCDHA12-201ENST00000398631 SRRM5B3KS81 715 aa13.52□□□□□ -0.24
PCDHA12-201ENST00000398631 TNFRSF14Q92956 283 aa13.52□□□□□ -0.24
PCDHA12-201ENST00000398631 A0A087WV48 116 aa13.52□□□□□ -0.25
PCDHA12-201ENST00000398631 NPFFO15130 113 aa13.52□□□□□ -0.25
PCDHA12-201ENST00000398631 GATA2P23769 480 aaPredicted RBP13.52□□□□□ -0.25
PCDHA12-201ENST00000398631 PLAURQ03405 335 aa13.52□□□□□ -0.25
PCDHA12-201ENST00000398631 PRB3Q04118 309 aaPredicted RBP13.52□□□□□ -0.25
PCDHA12-201ENST00000398631 IGKV3OR2-268A0A0C4DH90 116 aa13.52□□□□□ -0.25
PCDHA12-201ENST00000398631 J3QRE1 110 aa13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 PPP1R17O96001 155 aa13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 A8MXK9 166 aa13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 HINT1P49773 126 aaPredicted RBP13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 TFF1P04155 84 aa13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 MIR17HGQ75NE6 70 aa13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 CIARTQ8N365 385 aaPredicted RBP13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
PCDHA12-201ENST00000398631 CD24P25063 80 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 PVRIGQ6DKI7 326 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 PAQR4Q8N4S7 273 aaPredicted RBP13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 DUX3Q96PT4 197 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 RNF222A6NCQ9 220 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 CBLN1P23435 193 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 DUTP33316 252 aaKnown RBP13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 MEIG1Q5JSS6 88 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 TMEM183AQ8IXX5 376 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 COPS9Q8WXC6 57 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 FBLL1A6NHQ2 334 aaKnown RBP13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 H7C2G1 150 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 TIMM23O14925 209 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 FOXA3P55318 350 aaPredicted RBP13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 Q0VFX4 171 aa13.5□□□□□ -0.25
PCDHA12-201ENST00000398631 GRIFINA4D1Z8 144 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 VDAC2P45880 294 aaPredicted RBP13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 DSCR9P59020 149 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 FMC1Q96HJ9 113 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 RPUSD1Q9UJJ7 312 aaKnown RBP13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 C18orf12Q96KH6 178 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 PMCHL2Q9BQD1 86 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 SCO2A0A1W2PP80 73 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 TMEM262E9PQX1 116 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 EFNA4P52798 201 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 TAS2R60P59551 318 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 EFNB1P98172 346 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 BMPERQ8N8U9 685 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 IGKV1-12A0A0C4DH73 117 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 IGKV1D-12P01611 117 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 REC114Q7Z4M0 266 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 Q9H3A6 140 aa13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 ZNF256Q9Y2P7 627 aaPredicted RBP13.49□□□□□ -0.25
PCDHA12-201ENST00000398631 OTX1P32242 354 aaPredicted RBP13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 RHOGP84095 191 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 LRTM2Q8N967 370 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 C7orf71A4D174 169 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 ATP5G3P48201 142 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 SUMO2P61956 95 aaKnown RBP13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 IL36BQ9NZH7 164 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 TRAV40A0A0B4J280 105 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 Q6AWC8 147 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 RNF125Q96EQ8 232 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 SLC50A1Q9BRV3 221 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 NYNRINQ9P2P1 1898 aaKnown RBP13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 OR9G9P0C7N8 305 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 SLC25A15Q9Y619 301 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
PCDHA12-201ENST00000398631 PSMB11A5LHX3 300 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 PLP1P60201 277 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 LOC102724200A0A096LPH7 203 aaPredicted RBP13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 RAMP3O60896 148 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 UQCRFS1P47985 274 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 C21orf62-AS1Q17RA5 79 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 UNQ6494/PRO21346Q6UXR6 183 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 SLC17A3O00476 420 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 WNT2P09544 360 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 ID3Q02535 119 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 BIVMQ86UB2 503 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 LINC01587Q99440 93 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 SOX21Q9Y651 276 aaPredicted RBP13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 PAX1P15863 534 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms