RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 IGKV1D-33P01593 117 aa14.74□□□□□ -0.05
MBD1-208ENST00000398493 IGKV1-33P01594 117 aa14.74□□□□□ -0.05
MBD1-208ENST00000398493 IGLV2-23P01705 113 aa14.74□□□□□ -0.05
MBD1-208ENST00000398493 PNKDQ8N490 385 aa14.74□□□□□ -0.05
MBD1-208ENST00000398493 LINC01356Q8N9X3 169 aa14.74□□□□□ -0.05
MBD1-208ENST00000398493 A0A1W2PPV4 95 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 B4DSR2 109 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 NDUFS6O75380 124 aaKnown RBP14.73□□□□□ -0.05
MBD1-208ENST00000398493 MSMBP08118 114 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 CDC34P49427 236 aaPredicted RBP14.73□□□□□ -0.05
MBD1-208ENST00000398493 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 RNF5Q99942 180 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 SLC25A22Q9H936 323 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 ZFHX3Q15911 3703 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 FOXH1O75593 365 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 TGFAP01135 160 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 ARF6P62330 175 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 BSXQ3C1V8 233 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 C1orf122Q6ZSJ8 110 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 RAB24Q969Q5 203 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 BIN3Q9NQY0 253 aa14.73□□□□□ -0.05
MBD1-208ENST00000398493 POLR3KQ9Y2Y1 108 aaPredicted RBP14.73□□□□□ -0.05
MBD1-208ENST00000398493 WNK2Q9Y3S1 2297 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 SLC25A17O43808 307 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 ACTL6BO94805 426 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 SNRNP70P08621 437 aaKnown RBP14.72□□□□□ -0.05
MBD1-208ENST00000398493 CEACAM3P40198 252 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 PSMB3P49720 205 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 CEBPGP53567 150 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 AKIRIN2Q53H80 203 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 ARSJQ5FYB0 599 aaPredicted RBP14.72□□□□□ -0.05
MBD1-208ENST00000398493 CYB5R2Q6BCY4 276 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 MMD2Q8IY49 270 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 OR11H6Q8NGC7 330 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 OR4P4Q8NGL7 312 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 MGST2Q99735 147 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 GGTLC1Q9BX51 225 aa14.72□□□□□ -0.05
MBD1-208ENST00000398493 ZNF430Q9H8G1 570 aaPredicted RBP14.72□□□□□ -0.05
MBD1-208ENST00000398493 LSM4Q9Y4Z0 139 aaKnown RBP14.72□□□□□ -0.05
MBD1-208ENST00000398493 A0A087WWC5 75 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 IGHV3-72A0A0B4J1Y9 119 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 SEC14L6B5MCN3 397 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 RNASE2P10153 161 aaKnown RBP14.71□□□□□ -0.05
MBD1-208ENST00000398493 PRTN3P24158 256 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 HTR1DP28221 377 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 MAS1LP35410 378 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 RAB5BP61020 215 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 Q8N7P7 452 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 CACNG8Q8WXS5 425 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 MANBALQ9NQG1 85 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 HIF1ANQ9NWT6 349 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 PXMP4Q9Y6I8 212 aa14.71□□□□□ -0.05
MBD1-208ENST00000398493 CRYBA1P05813 215 aa14.71□□□□□ -0.06
MBD1-208ENST00000398493 GPX4P36969 197 aaPredicted RBP14.71□□□□□ -0.06
MBD1-208ENST00000398493 RPL29P47914 159 aaKnown RBP14.71□□□□□ -0.06
MBD1-208ENST00000398493 TMEM144Q7Z5S9 345 aa14.71□□□□□ -0.06
MBD1-208ENST00000398493 SLC35E3Q7Z769 313 aa14.71□□□□□ -0.06
MBD1-208ENST00000398493 OR10W1Q8NGF6 305 aa14.71□□□□□ -0.06
MBD1-208ENST00000398493 NIPSNAP3BQ9BS92 247 aa14.71□□□□□ -0.06
MBD1-208ENST00000398493 GSX1Q9H4S2 264 aaPredicted RBP14.71□□□□□ -0.06
MBD1-208ENST00000398493 DPM3Q9P2X0 92 aa14.71□□□□□ -0.06
MBD1-208ENST00000398493 PUS1Q9Y606 427 aaKnown RBP eCLIP14.71□□□□□ -0.06
MBD1-208ENST00000398493 B4DEV8 164 aa14.7□□□□□ -0.06
MBD1-208ENST00000398493 LY6LH3BQJ8 138 aa14.7□□□□□ -0.06
MBD1-208ENST00000398493 DLX1P56177 255 aa14.7□□□□□ -0.06
MBD1-208ENST00000398493 KIR3DL3Q8N743 410 aa14.7□□□□□ -0.06
MBD1-208ENST00000398493 CYB561D1Q8N8Q1 229 aa14.7□□□□□ -0.06
MBD1-208ENST00000398493 PRELID1Q9Y255 219 aa14.7□□□□□ -0.06
MBD1-208ENST00000398493 IGHV2-70DA0A0C4DH43 119 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 LY6G6DO95868 133 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 B2MP61769 119 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 TPTE2P1Q5T6R2 138 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 MIC13Q5XKP0 118 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 HIST1H2BAQ96A08 127 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 SONP18583 2426 aaKnown RBP14.69□□□□□ -0.06
MBD1-208ENST00000398493 CXorf65A6NEN9 183 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 C1orf196B1AJZ1 125 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 H3BQ15 152 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 FBP1P09467 338 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 CD69Q07108 199 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 PNRC1Q12796 327 aaPredicted RBP14.69□□□□□ -0.06
MBD1-208ENST00000398493 PSG5Q15238 335 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 PRSS8Q16651 343 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 IQCF2Q8IXL9 164 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 RNASEH2CQ8TDP1 164 aaKnown RBP14.69□□□□□ -0.06
MBD1-208ENST00000398493 MALSU1Q96EH3 234 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 TVP23CQ96ET8 276 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 SIRT7Q9NRC8 400 aa14.69□□□□□ -0.06
MBD1-208ENST00000398493 TEP1Q99973 2627 aaKnown RBP14.68□□□□□ -0.06
MBD1-208ENST00000398493 MTORP42345 2549 aa14.68□□□□□ -0.06
MBD1-208ENST00000398493 HMGB3O15347 200 aaKnown RBP14.68□□□□□ -0.06
MBD1-208ENST00000398493 CD5LO43866 347 aa14.68□□□□□ -0.06
MBD1-208ENST00000398493 FOSL1P15407 271 aa14.68□□□□□ -0.06
MBD1-208ENST00000398493 PRB3Q04118 309 aaPredicted RBP14.68□□□□□ -0.06
MBD1-208ENST00000398493 RITA1Q96K30 269 aa14.68□□□□□ -0.06
MBD1-208ENST00000398493 SLC35E1Q96K37 410 aa14.68□□□□□ -0.06
MBD1-208ENST00000398493 TNCP24821 2201 aa14.68□□□□□ -0.06
MBD1-208ENST00000398493 TRAV20A0A0B4J274 112 aa14.67□□□□□ -0.06
MBD1-208ENST00000398493 YIF1AO95070 293 aa14.67□□□□□ -0.06
MBD1-208ENST00000398493 AVPP01185 164 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms