RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 HOXB5P09067 269 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 AKR1C2P52895 323 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 ECSCRQ19T08 205 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 IGKV1OR2-108A0A075B7D4 117 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 REG1AP05451 166 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 ARL16Q0P5N6 197 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 SCARB1Q8WTV0 552 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 LYRM2Q9NU23 88 aaPredicted RBP8.11□□□□□ -1.11
NUP98-205ENST00000397007 OPN1MWP04001 364 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 CTSGP08311 255 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 OPN1MW2P0DN77 364 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 OPN1MW3P0DN78 364 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 GPX4P36969 197 aaPredicted RBP8.11□□□□□ -1.11
NUP98-205ENST00000397007 RHOGP84095 191 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 PLGLAQ15195 96 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 CENPVQ7Z7K6 275 aaPredicted RBP8.11□□□□□ -1.11
NUP98-205ENST00000397007 OR4X2Q8NGF9 303 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 OR4X1Q8NH49 305 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 PLEKHA3Q9HB20 300 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 OR13C7P0DN81 318 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
NUP98-205ENST00000397007 FCN2Q15485 313 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 ARSJQ5FYB0 599 aaPredicted RBP8.1□□□□□ -1.11
NUP98-205ENST00000397007 SLC24A4Q8NFF2 622 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 OR5T1Q8NG75 326 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 SLC25A4P12235 298 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 MYCNOSP40205 109 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 IAH1Q2TAA2 248 aaPredicted RBP8.1□□□□□ -1.11
NUP98-205ENST00000397007 IGHV4OR15-8A0A075B7B6 117 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 A0A087WW49 117 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 CORTO00230 105 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 SCAF4O95104 1147 aaKnown RBP8.1□□□□□ -1.11
NUP98-205ENST00000397007 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
NUP98-205ENST00000397007 GIPP09681 153 aaPredicted RBP8.1□□□□□ -1.11
NUP98-205ENST00000397007 POLR2GP62487 172 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP98-205ENST00000397007 CD69Q07108 199 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 EGFEM1PQ0D2K5 195 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 C15orf32Q32M92 178 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 GPHB5Q86YW7 130 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 U3KQE9 123 aa8.1□□□□□ -1.11
NUP98-205ENST00000397007 CNIH1O95406 144 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 Q5BKY6 102 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
NUP98-205ENST00000397007 OR5AC2Q9NZP5 309 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 RAB32Q13637 225 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 SPINK9Q5DT21 86 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
NUP98-205ENST00000397007 ST6GAL2Q96JF0 529 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 GOSR2O14653 212 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 MED6O75586 246 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 IGKV1-17P01599 117 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 IGLC1P0CG04 106 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 NKX2-1P43699 371 aaPredicted RBP8.09□□□□□ -1.11
NUP98-205ENST00000397007 C9orf152Q5JTZ5 239 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 PRSS54Q6PEW0 395 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 CXorf58Q96LI9 332 aa8.09□□□□□ -1.11
NUP98-205ENST00000397007 CIB3Q96Q77 187 aaPredicted RBP8.09□□□□□ -1.11
NUP98-205ENST00000397007 A0A0G2JLM5 398 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 CCNKO75909 580 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 TRGV3P03979 118 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 DEFA5Q01523 94 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 C12orf54Q6X4T0 127 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 GGACTQ9BVM4 153 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 FBXL7Q9UJT9 491 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 IGSF23A1L1A6 192 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 SIX6O95475 246 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 MPC2O95563 127 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 SAMD5Q5TGI4 173 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 C8orf86Q6ZUL3 223 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 BSCL2Q96G97 398 aaPredicted RBP8.08□□□□□ -1.12
NUP98-205ENST00000397007 TCRBV4S1A1TA0A5B7 111 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 APELAP0DMC3 54 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 P2RY1P47900 373 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 MLANAQ16655 118 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 GSG1LQ6UXU4 331 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 CHRDL1Q9BU40 450 aa8.08□□□□□ -1.12
NUP98-205ENST00000397007 JMJD1CQ15652 2540 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 WI2-2373I1.2A0A1W2PRP0 233 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 OR2J3O76001 311 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 MT-CO2P00403 227 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 NPY1RP25929 384 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 TPPP2P59282 170 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 GAMTQ14353 236 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 TMEM65Q6PI78 240 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 OR1S1Q8NH92 325 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 C17orf77Q96MU5 243 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 ERHP84090 104 aaKnown RBP8.07□□□□□ -1.12
NUP98-205ENST00000397007 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 PEF1Q9UBV8 284 aaKnown RBP8.07□□□□□ -1.12
NUP98-205ENST00000397007 IFNA21P01568 189 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 PLP1P60201 277 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 PPP1R1CQ8WVI7 109 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 AQP10Q96PS8 301 aa8.07□□□□□ -1.12
NUP98-205ENST00000397007 RNF222A6NCQ9 220 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 TGOLN2O43493 480 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 CLN5O75503 358 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms