RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ZNF257Q9Y2Q1 563 aa13.9□□□□□ -0.18
TNFSF13-205ENST00000396545 SRRM4A7MD48 611 aaKnown RBP13.89□□□□□ -0.19
TNFSF13-205ENST00000396545 FLYWCH2Q96CP2 140 aaKnown RBP13.89□□□□□ -0.19
TNFSF13-205ENST00000396545 TRAV1-1A0A0B4J248 108 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 C9JQL5 133 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 PRSS46E5RG02 174 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 H7C2Y5 167 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 H2AFB1P0C5Y9 115 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 SAA4P35542 130 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 UBE2E1P51965 193 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 GUK1Q16774 197 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 HCP5Q6MZN7 132 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 CCDC144NLQ6NUI1 221 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 OR5R1Q8NH85 324 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 VSTM2AQ8TAG5 236 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 RNF5Q99942 180 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 TBL2Q9Y4P3 447 aaKnown RBP13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 A0A1W2PRD5 423 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 A0A1W2PRF3 423 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 A0A1W2PRM7 423 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 F8W036 122 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 SAA1P0DJI8 122 aaPredicted RBP13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 LGALS7P47929 136 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 LGALS4P56470 323 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 PEA15Q15121 130 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 TPTE2P1Q5T6R2 138 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 ATRAIDQ6UW56 229 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 PBDC1Q9BVG4 233 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 GGACTQ9BVM4 153 aa13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 HEYLQ9NQ87 328 aaPredicted RBP13.88□□□□□ -0.19
TNFSF13-205ENST00000396545 IGHV1-3A0A0C4DH29 117 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 KBTBD11O94819 623 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 HBE1P02100 147 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 HOXA1P49639 335 aaPredicted RBP13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 SVBPQ8N300 66 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 OR4A5Q8NH83 315 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 TMEM170AQ8WVE7 144 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 SMDT1Q9H4I9 107 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 RPRMQ9NS64 109 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 FKBP11Q9NYL4 201 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 KIAA1456Q9P272 454 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 OR51B2Q9Y5P1 312 aa13.87□□□□□ -0.19
TNFSF13-205ENST00000396545 RRHO14718 337 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 IFNA10P01566 189 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 SFTA3P0C7M3 94 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 FGF7P21781 194 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 REG1BP48304 166 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 CCL20P78556 96 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 PRCDQ00LT1 54 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 DEFA5Q01523 94 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 MBD3L1Q8WWY6 194 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 RBMXL1Q96E39 390 aaKnown RBP13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 HARBI1Q96MB7 349 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 WDR83OSQ9Y284 106 aa13.86□□□□□ -0.19
TNFSF13-205ENST00000396545 CD1BP29016 333 aa13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 RPS16P62249 146 aaKnown RBP13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 DLK1P80370 383 aa13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 GUCA2BQ16661 112 aa13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 ETV3LQ6ZN32 361 aa13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 OR5B3Q8NH48 314 aa13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 VSIRQ9H7M9 311 aa13.85□□□□□ -0.19
TNFSF13-205ENST00000396545 RAB11AP62491 216 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 HABP2Q14520 560 aaPredicted RBP13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 ZNF726P1Q15940 193 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 MOB3BQ86TA1 216 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 FAM110DQ8TAY7 271 aaPredicted RBP13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 TMEM167AQ8TBQ9 72 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 C17orf50Q8WW18 174 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 MALSU1Q96EH3 234 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 AJUBAQ96IF1 538 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 NPCDR1Q9BY65 106 aa13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 NKX6-2Q9C056 277 aaPredicted RBP13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 TET2Q6N021 2002 aaPredicted RBP13.84□□□□□ -0.19
TNFSF13-205ENST00000396545 A0A1W2PPI3 338 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 IGLV2-23P01705 113 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 MYOD1P15172 320 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 NPY1RP25929 384 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 RAB2AP61019 212 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 VMA21Q3ZAQ7 101 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 C1QL4Q86Z23 238 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 SLC24A4Q8NFF2 622 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 RCC1LQ96I51 464 aaKnown RBP13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 EIF5A2Q9GZV4 153 aaKnown RBP13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 ENY2Q9NPA8 101 aa13.83□□□□□ -0.19
TNFSF13-205ENST00000396545 TEX50A0A1B0GTY4 177 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 INS-IGF2F8WCM5 200 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 H3BUX3 64 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 ATP5IP56385 69 aaPredicted RBP13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 BTN1A1Q13410 526 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 ACSM6Q6P461 480 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 SUN5Q8TC36 379 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 SFT2D1Q8WV19 159 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 PLEKHA3Q9HB20 300 aa13.83□□□□□ -0.2
TNFSF13-205ENST00000396545 A0A1B0GV50 99 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 RBFOX3A6NFN3 312 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 C17orf112F2Z3M2 114 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 SOX15O60248 233 aa13.82□□□□□ -0.2
TNFSF13-205ENST00000396545 MPDU1O75352 247 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms