RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CACNG8Q8WXS5 425 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 ATP5SQ99766 215 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 PRSS22Q9GZN4 317 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 SLC25A32Q9H2D1 315 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 F11RQ9Y624 299 aaKnown RBP10.82□□□□□ -0.68
VAPB-202ENST00000395802 A0A1B0GW64 132 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 LINC00862A6NCI5 91 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 FNDC10F2Z333 226 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 AP4M1O00189 453 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 IGF1P05019 195 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 AREGP15514 252 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 CTRB1P17538 263 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
VAPB-202ENST00000395802 CTRB2Q6GPI1 263 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 HAPLN4Q86UW8 402 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 LFNGQ8NES3 379 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 P2RX4Q99571 388 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 HSPB9Q9BQS6 159 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 FAM103A1Q9BTL3 118 aaKnown RBP10.81□□□□□ -0.68
VAPB-202ENST00000395802 ZNF580Q9UK33 172 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 HIST1H1BP16401 226 aaKnown RBP10.81□□□□□ -0.68
VAPB-202ENST00000395802 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
VAPB-202ENST00000395802 ARL16Q0P5N6 197 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 UNQ5815/PRO19632Q6UWF5 114 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 GINS3Q9BRX5 216 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 TMEM147Q9BVK8 224 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 TNFRSF19Q9NS68 423 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 UQCC1Q9NVA1 299 aa10.81□□□□□ -0.68
VAPB-202ENST00000395802 SETXQ7Z333 2677 aaKnown RBP10.81□□□□□ -0.68
VAPB-202ENST00000395802 OPRK1P41145 380 aa10.8□□□□□ -0.68
VAPB-202ENST00000395802 DLK1P80370 383 aa10.8□□□□□ -0.68
VAPB-202ENST00000395802 NDPQ00604 133 aa10.8□□□□□ -0.68
VAPB-202ENST00000395802 SCGB1C1Q8TD33 95 aa10.8□□□□□ -0.68
VAPB-202ENST00000395802 WNT10AQ9GZT5 417 aa10.8□□□□□ -0.68
VAPB-202ENST00000395802 TRAV41A0A0B4J266 112 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 MPDU1O75352 247 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 FBXO24O75426 580 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 REG1AP05451 166 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 FAM157CP0CG43 387 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 APELAP0DMC3 54 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 BLCAPP62952 87 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 ECSCRQ19T08 205 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 ARSJQ5FYB0 599 aaPredicted RBP10.79□□□□□ -0.68
VAPB-202ENST00000395802 PVRIGQ6DKI7 326 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 FAM110DQ8TAY7 271 aaPredicted RBP10.79□□□□□ -0.68
VAPB-202ENST00000395802 PARD6GQ9BYG4 376 aaPredicted RBP10.79□□□□□ -0.68
VAPB-202ENST00000395802 NPVFQ9HCQ7 196 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 SPP1P10451 314 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 EGR2P11161 476 aaPredicted RBP10.79□□□□□ -0.68
VAPB-202ENST00000395802 RAB31Q13636 194 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 VWC2Q2TAL6 325 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 TMEM170AQ8WVE7 144 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 GNPNAT1Q96EK6 184 aaPredicted RBP10.79□□□□□ -0.68
VAPB-202ENST00000395802 CXorf58Q96LI9 332 aa10.79□□□□□ -0.68
VAPB-202ENST00000395802 DNAJC9-AS1A6NH13 148 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 CRYBA1P05813 215 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 SEC11BP0C7V7 166 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 HILS1P60008 231 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 CD69Q07108 199 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 HSD17B11Q8NBQ5 300 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 LRRC20Q8TCA0 184 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 RNF141Q8WVD5 230 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 MISP3Q96FF7 219 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 SLC35E1Q96K37 410 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 HIVEP1P15822 2718 aa10.78□□□□□ -0.68
VAPB-202ENST00000395802 SMCO3A2RU48 225 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 SH2D7A6NKC9 451 aaPredicted RBP10.77□□□□□ -0.68
VAPB-202ENST00000395802 INAFM1C9JVW0 142 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 PRSS46E5RG02 174 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 H3BUA1 57 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 SOX15O60248 233 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 SCGB2A1O75556 95 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 SH3BGRL3Q9H299 93 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 MED9Q9NWA0 146 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 FBXO7Q9Y3I1 522 aa10.77□□□□□ -0.68
VAPB-202ENST00000395802 C17orf112F2Z3M2 114 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 BRI3O95415 125 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
VAPB-202ENST00000395802 ATP6V0CP27449 155 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 SULT1A2P50226 295 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 AKR1C1Q04828 323 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 TEPPQ6URK8 271 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 SLC16A13Q7RTY0 426 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 ZNF709Q8N972 641 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 KCNIP2Q9NS61 270 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
VAPB-202ENST00000395802 UBE2L5PA0A1B0GUS4 154 aa10.76□□□□□ -0.69
VAPB-202ENST00000395802 SLC35B1P78383 322 aa10.76□□□□□ -0.69
VAPB-202ENST00000395802 TMEM144Q7Z5S9 345 aa10.76□□□□□ -0.69
VAPB-202ENST00000395802 COMMD7Q86VX2 200 aa10.76□□□□□ -0.69
VAPB-202ENST00000395802 WDR61Q9GZS3 305 aaKnown RBP10.76□□□□□ -0.69
VAPB-202ENST00000395802 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
VAPB-202ENST00000395802 MTORP42345 2549 aa10.76□□□□□ -0.69
VAPB-202ENST00000395802 ANK3Q12955 4377 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms