RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
CXCL12-205ENST00000395794 SP6Q3SY56 376 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 ZNF114Q8NC26 417 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 SMIM4Q8WVI0 70 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 PINX1Q96BK5 328 aaKnown RBP10.33□□□□□ -0.76
CXCL12-205ENST00000395794 TXN2Q99757 166 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 C5orf66Q9H5L9 145 aa10.33□□□□□ -0.76
CXCL12-205ENST00000395794 RSL24D1Q9UHA3 163 aaKnown RBP10.33□□□□□ -0.76
CXCL12-205ENST00000395794 KMT2CQ8NEZ4 4911 aaKnown RBP10.32□□□□□ -0.76
CXCL12-205ENST00000395794 K7EMT4 169 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 CTDSPLO15194 276 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 MT-CO2P00403 227 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 IGKV1-5P01602 117 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 AKAIN1P0CW23 69 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 SURF2Q15527 256 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-205ENST00000395794 IZUMO4Q1ZYL8 232 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 LINC00322Q6ZN03 302 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-205ENST00000395794 DYNC2LI1Q8TCX1 351 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 SPAG8Q99932 426 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-205ENST00000395794 PRRT1Q99946 306 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 WFDC10AQ9H1F0 79 aa10.32□□□□□ -0.76
CXCL12-205ENST00000395794 STAB2Q8WWQ8 2551 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 NBEAL2Q6ZNJ1 2754 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 A0A0B4J293 547 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
CXCL12-205ENST00000395794 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
CXCL12-205ENST00000395794 C15orf62A8K5M9 175 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 I3L2K1 104 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 CORTO00230 105 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 ST8SIA3O43173 380 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 GNG7O60262 68 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 CTSGP08311 255 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
CXCL12-205ENST00000395794 UCP1P25874 307 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 HOXA1P49639 335 aaPredicted RBP10.31□□□□□ -0.76
CXCL12-205ENST00000395794 SPINK9Q5DT21 86 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 FAAP20Q6NZ36 180 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 DUSP18Q8NEJ0 188 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
CXCL12-205ENST00000395794 HUWE1Q7Z6Z7 4374 aaKnown RBP10.31□□□□□ -0.76
CXCL12-205ENST00000395794 IGHV3OR16-8A0A075B7F1 116 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 F8W735 103 aaPredicted RBP10.3□□□□□ -0.76
CXCL12-205ENST00000395794 TSPAN4O14817 238 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 ZNF207O43670 478 aaKnown RBP10.3□□□□□ -0.76
CXCL12-205ENST00000395794 FCGR2BP31994 310 aaPredicted RBP10.3□□□□□ -0.76
CXCL12-205ENST00000395794 ADMP35318 185 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 ETV6P41212 452 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 NPBWR1P48145 328 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 DHODHQ02127 395 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 FAM219AQ8IW50 185 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 SCGB3A2Q96PL1 93 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 GGTLC1Q9BX51 225 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 TMEM222Q9H0R3 208 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 NAA60Q9H7X0 242 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 EDA2RQ9HAV5 297 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 SCP2D1Q9UJQ7 156 aa10.3□□□□□ -0.76
CXCL12-205ENST00000395794 LOC102724200A0A096LPH7 203 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-205ENST00000395794 FABP12A6NFH5 140 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 SCGB2A1O75556 95 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 IGHV3-48P01763 117 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 OR5AC1P0C628 307 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 P0C879 139 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 BMI1P35226 326 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 OR4C16Q8NGL9 310 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 MCFD2Q8NI22 146 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 IL17DQ8TAD2 202 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 GINS3Q9BRX5 216 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 RTBDNQ9BSG5 229 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-205ENST00000395794 NXF2Q9GZY0 626 aaKnown RBP10.29□□□□□ -0.76
CXCL12-205ENST00000395794 RETNQ9HD89 108 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-205ENST00000395794 MCUBQ9NWR8 336 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
CXCL12-205ENST00000395794 CCDC160A6NGH7 325 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 H3BMQ9 156 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 GSTZ1O43708 216 aaPredicted RBP10.28□□□□□ -0.76
CXCL12-205ENST00000395794 CDS2O95674 445 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 SPCS3P61009 180 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 OR51S1Q8NGJ8 323 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
CXCL12-205ENST00000395794 FAM110AQ9BQ89 295 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 SLIRPQ9GZT3 109 aaKnown RBP10.28□□□□□ -0.76
CXCL12-205ENST00000395794 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
CXCL12-205ENST00000395794 TRAV14DV4A0A0A6YYC5 116 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 IGHV7-4-1A0A0J9YVY3 117 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 ANKRD20A5PA0PJZ0 165 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 TNFSF8P32971 234 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 APOC4P55056 127 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 CMC4P56277 68 aaPredicted RBP10.27□□□□□ -0.77
CXCL12-205ENST00000395794 TMEM268Q5VZI3 342 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 OR10C1Q96KK4 312 aa10.27□□□□□ -0.77
CXCL12-205ENST00000395794 RHPN1-AS1Q9BWJ2 59 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms