RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GPX4P36969 197 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-202ENST00000395354 OPRK1P41145 380 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 RPL27AP46776 148 aaKnown RBP15.39■□□□□ 0.05
LMNB1-202ENST00000395354 COMPP49747 757 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-202ENST00000395354 AKR1C1Q04828 323 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 ARSJQ5FYB0 599 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-202ENST00000395354 ACSM6Q6P461 480 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 RNASEH2CQ8TDP1 164 aaKnown RBP15.39■□□□□ 0.05
LMNB1-202ENST00000395354 CACNG8Q8WXS5 425 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 MALSU1Q96EH3 234 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 RCC1LQ96I51 464 aaKnown RBP15.39■□□□□ 0.05
LMNB1-202ENST00000395354 VSIRQ9H7M9 311 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 FAM96BQ9Y3D0 163 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 FSHBP01225 129 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 ELLP55199 621 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-202ENST00000395354 WT1-ASQ06250 92 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 RAB31Q13636 194 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 ACOT6Q3I5F7 207 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-202ENST00000395354 FFAR4Q5NUL3 377 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 TEPPQ6URK8 271 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 BRD3OSQ6XYD6 125 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 IL17RELQ6ZVW7 336 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 OR2T10Q8NGZ9 312 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 SRSF8Q9BRL6 282 aaKnown RBP15.38■□□□□ 0.05
LMNB1-202ENST00000395354 SEC11CQ9BY50 192 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 TMEM231Q9H6L2 316 aa15.38■□□□□ 0.05
LMNB1-202ENST00000395354 CARHSP1Q9Y2V2 147 aaKnown RBP15.38■□□□□ 0.05
LMNB1-202ENST00000395354 NPFFO15130 113 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 NDUFA3O95167 84 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 M6PRP20645 277 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 HNF1AP20823 631 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 EBI3Q14213 229 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 ZNF726P1Q15940 193 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 TNXAQ16473 311 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 C10orf55Q5SWW7 151 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 RUSC1-AS1Q66K80 236 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 ZNF114Q8NC26 417 aa15.37■□□□□ 0.05
LMNB1-202ENST00000395354 NBR2O15453 112 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 IGKV1D-33P01593 117 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 IGKV1-33P01594 117 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 SNRNP70P08621 437 aaKnown RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 SRP14P37108 136 aaKnown RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 BPIFB3P59826 476 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 CCL20P78556 96 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 CD69Q07108 199 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 PMS2P11Q13670 270 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 SSX2Q16385 188 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 PVRIGQ6DKI7 326 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 TMEM144Q7Z5S9 345 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 RPP25LQ8N5L8 163 aaKnown RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 OR10G4Q8NGN3 311 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 OR10G9Q8NGN4 311 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 OR10G7Q8NGN6 311 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 EAF1Q96JC9 268 aaPredicted RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 MGST2Q99735 147 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 ACTR3CQ9C0K3 210 aaPredicted RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 EIF5A2Q9GZV4 153 aaKnown RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 FBXL15Q9H469 300 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 TEP1Q99973 2627 aaKnown RBP15.36■□□□□ 0.05
LMNB1-202ENST00000395354 CTXND1A0A1B0GTU2 59 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 IGLC7A0M8Q6 106 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 RBFOX3A6NFN3 312 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 F8W036 122 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 CYB5BO43169 146 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 APOC3P02656 99 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 OR13C7P0DN81 318 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 SAA4P35542 130 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 MMDQ15546 238 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 GGTLC1Q9BX51 225 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 SLC39A9Q9NUM3 307 aa15.36■□□□□ 0.05
LMNB1-202ENST00000395354 NSD1Q96L73 2696 aaPredicted RBP15.35■□□□□ 0.05
LMNB1-202ENST00000395354 P2RX4Q99571 388 aa15.35■□□□□ 0.05
LMNB1-202ENST00000395354 MAP1LC3B2A6NCE7 125 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 SEC14L6B5MCN3 397 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 TSPAN9O75954 239 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 SFTA3P0C7M3 94 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 ADCYAP1P18509 176 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 RPL29P47914 159 aaKnown RBP15.34■□□□□ 0.05
LMNB1-202ENST00000395354 PLGLAQ15195 96 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 DYNAPQ8N1N2 210 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 Q8N6K4 173 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 MAP1LC3BQ9GZQ8 125 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 CDC42EP3Q9UKI2 254 aa15.34■□□□□ 0.05
LMNB1-202ENST00000395354 SOX21Q9Y651 276 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-202ENST00000395354 A0A1B0GV50 99 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 C9JQL5 133 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 INAFM1C9JVW0 142 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 HNF4GQ14541 408 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 ZNF506Q5JVG8 444 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 LCN15Q6UWW0 184 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 SVBPQ8N300 66 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 C22orf15Q8WYQ4 148 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 PXMP4Q9Y6I8 212 aa15.33■□□□□ 0.05
LMNB1-202ENST00000395354 TEX22C9J3V5 150 aa15.32■□□□□ 0.04
LMNB1-202ENST00000395354 CORTO00230 105 aa15.32■□□□□ 0.04
LMNB1-202ENST00000395354 BRS3P32247 399 aa15.32■□□□□ 0.04
LMNB1-202ENST00000395354 GAMTQ14353 236 aa15.32■□□□□ 0.04
LMNB1-202ENST00000395354 HES1Q14469 280 aa15.32■□□□□ 0.04
LMNB1-202ENST00000395354 SLC16A13Q7RTY0 426 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms