RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 P01737 135 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 GPX1P07203 203 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 PTGDSP41222 190 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 SMIM21Q3B7S5 101 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 PCSK4Q6UW60 755 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 ODF3L1Q8IXM7 274 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 ZNF645Q8N7E2 425 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 ZNF441Q8N8Z8 693 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 C10orf35Q96D05 121 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 AMMECR1Q9Y4X0 333 aaPredicted RBP7.33□□□□□ -1.24
RTN4-206ENST00000394611 TMEM210A6NLX4 147 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 C10orf128Q5T292 105 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 OR8G5Q8NG78 346 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 POM121L2Q96KW2 1035 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 GTSF1LQ9H1H1 148 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 THYN1Q9P016 225 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 SAP30O75446 220 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 CNIH1O95406 144 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 HES1Q14469 280 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 EFNB3Q15768 340 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 RTL8BQ17RB0 113 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 SAPCD1Q5SSQ6 148 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 SLC35E4Q6ICL7 350 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 TMEM54Q969K7 222 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 NUDT11Q96G61 164 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 KLK15Q9H2R5 256 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 TMEM242Q9NWH2 141 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 CDC42EP3Q9UKI2 254 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 LOC400499M0QZD8 3231 aa7.33□□□□□ -1.24
RTN4-206ENST00000394611 A0A1W2PS18 150 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 PRSS1P07477 247 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 PRSS57Q6UWY2 283 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 FAM222BQ8WU58 562 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 FAM168AQ92567 244 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 NPIPB3Q92617 1050 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 COL27A1Q8IZC6 1860 aaPredicted RBP7.32□□□□□ -1.24
RTN4-206ENST00000394611 IGHV3OR16-13A0A075B7E8 117 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 IGHV3-74A0A0B4J1X5 117 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 TYMSP04818 313 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 FAM87AP0C7U9 286 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 MPV17P39210 176 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 CCL8P80075 99 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 SLAQ13239 276 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 LINC00173Q6ZV60 143 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 SPTBN4Q9H254 2564 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 OR51B2Q9Y5P1 312 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 IGKV3-7A0A075B6H7 116 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 CGB1A6NKQ9 187 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 VENTXO95231 258 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 AMY1AP04745 511 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 IGLL1P15814 213 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 KLF3P57682 345 aaPredicted RBP7.32□□□□□ -1.24
RTN4-206ENST00000394611 ARF6P62330 175 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 RELQ04864 619 aaPredicted RBP7.32□□□□□ -1.24
RTN4-206ENST00000394611 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 C1orf185Q5T7R7 199 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 SPSB4Q96A44 273 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 REPIN1Q9BWE0 567 aaKnown RBP7.32□□□□□ -1.24
RTN4-206ENST00000394611 PIEZO1Q92508 2521 aa7.32□□□□□ -1.24
RTN4-206ENST00000394611 CFPP27918 469 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 DLX1P56177 255 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 PDPNQ86YL7 162 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 KCNE4Q8WWG9 221 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 LSM10Q969L4 123 aaKnown RBP7.31□□□□□ -1.24
RTN4-206ENST00000394611 HARBI1Q96MB7 349 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 CCL13Q99616 98 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 MGST2Q99735 147 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 MPC1Q9Y5U8 109 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 CSPG4Q6UVK1 2322 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 LOC102723996A0A087X1L8 192 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 IGLC2P0DOY2 106 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 IGLC3P0DOY3 106 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 MEOX1P50221 254 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 ERHP84090 104 aaKnown RBP7.31□□□□□ -1.24
RTN4-206ENST00000394611 C19orf35Q6ZS72 473 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 RNASEH2CQ8TDP1 164 aaKnown RBP7.31□□□□□ -1.24
RTN4-206ENST00000394611 CCL17Q92583 94 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 TMEM45BQ96B21 275 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 GGTLC1Q9BX51 225 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 SAP30LQ9HAJ7 183 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 ADAMTS20P59510 1910 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 IGHV1-45A0A0A0MS14 117 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 A0A1B0GW64 132 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 SP1P08047 785 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 LINC00614P0C842 121 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 VWC2Q2TAL6 325 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 TSKUQ8WUA8 353 aa7.31□□□□□ -1.24
RTN4-206ENST00000394611 ZNF430Q9H8G1 570 aaPredicted RBP7.31□□□□□ -1.24
RTN4-206ENST00000394611 K7EN84 100 aa7.3□□□□□ -1.24
RTN4-206ENST00000394611 HIST1H1EP10412 219 aaKnown RBP7.3□□□□□ -1.24
RTN4-206ENST00000394611 COX7A1P24310 79 aa7.3□□□□□ -1.24
RTN4-206ENST00000394611 FKBP2P26885 142 aaKnown RBP7.3□□□□□ -1.24
RTN4-206ENST00000394611 TEX45Q8NA69 505 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms