RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TAS2R45P59539 299 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 C20orf78Q9BR46 151 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 SPANXB1Q9NS25 103 aaPredicted RBP12.43□□□□□ -0.42
VLDLR-202ENST00000382099 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 DYSFO75923 2080 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 A0A1W2PQF6 199 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 TMEM249Q2WGJ8 235 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 TEX50A0A1B0GTY4 177 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 K7EMI3 77 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 DHHO43323 396 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 IGHV3-7P01780 117 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 EFNB3Q15768 340 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 AMTNQ6UX39 209 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 MIR17HGQ75NE6 70 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 ANKRD37Q7Z713 158 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 MGST2Q99735 147 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 GGTLC1Q9BX51 225 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 UFC1Q9Y3C8 167 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 H3BMG7 143 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 PPIFP30405 207 aaKnown RBP12.42□□□□□ -0.42
VLDLR-202ENST00000382099 FASLGP48023 281 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 HES3Q5TGS1 186 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 RHBDD2Q6NTF9 364 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 TREML4Q6UXN2 200 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 OR4A16Q8NH70 328 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 C11orf52Q96A22 123 aa12.42□□□□□ -0.42
VLDLR-202ENST00000382099 TSPAN13O95857 204 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 OPRK1P41145 380 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 DAZAP2Q15038 168 aaPredicted RBP12.41□□□□□ -0.42
VLDLR-202ENST00000382099 SPATA46Q5T0L3 261 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
VLDLR-202ENST00000382099 SGK494Q96LW2 274 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 CACNA1GO43497 2377 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 ARL3P36405 182 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 SLC35E4Q6ICL7 350 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 Q6ZR03 302 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 Q8N7P7 452 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 TMEM189A5PLL7 270 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 C15orf62A8K5M9 175 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 MOB1BQ7L9L4 216 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
VLDLR-202ENST00000382099 SNRNP40Q96DI7 357 aaKnown RBP12.41□□□□□ -0.42
VLDLR-202ENST00000382099 A0A1B0GWB2 263 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 SIVA1O15304 175 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 C8orf86Q6ZUL3 223 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 ZNF391Q9UJN7 358 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 JPT1Q9UK76 154 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 OR11H12B2RN74 326 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 NTF4P34130 210 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 GFERP55789 205 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 C3AR1Q16581 482 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 Q6ZS49 121 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 OR11H1Q8NG94 326 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 OR11H2Q8NH07 326 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 TMUB1Q9BVT8 246 aa12.4□□□□□ -0.42
VLDLR-202ENST00000382099 NHP2Q9NX24 153 aaKnown RBP12.4□□□□□ -0.42
VLDLR-202ENST00000382099 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 NCR2O95944 276 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 MT-ATP8P03928 68 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 IGFBP4P22692 258 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 LINC00205P59089 165 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 GAGE5Q13069 117 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 GAGE6Q13070 117 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 INO80CQ6PI98 192 aaPredicted RBP12.39□□□□□ -0.43
VLDLR-202ENST00000382099 CYSLTR1Q9Y271 337 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 FAM87AP0C7U9 286 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 FGF12P61328 243 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 GALMQ96C23 342 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
VLDLR-202ENST00000382099 CITED1Q99966 193 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 MPC1Q9Y5U8 109 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 ZFHX4Q86UP3 3567 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 B4GALT1P15291 398 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
VLDLR-202ENST00000382099 CHCHD1Q96BP2 118 aaKnown RBP12.39□□□□□ -0.43
VLDLR-202ENST00000382099 A8MWL6 223 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 SYNGR1O43759 233 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 ZNF32P17041 273 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 RPL30P62888 115 aaKnown RBP12.38□□□□□ -0.43
VLDLR-202ENST00000382099 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 C17orf98A8MV24 154 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 C21orf140B9A014 251 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 DEFB133Q30KQ1 61 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 LRP4O75096 1905 aa12.38□□□□□ -0.43
VLDLR-202ENST00000382099 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
VLDLR-202ENST00000382099 VDAC2P45880 294 aaPredicted RBP12.37□□□□□ -0.43
VLDLR-202ENST00000382099 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 BCL6BQ8N143 479 aaPredicted RBP12.37□□□□□ -0.43
VLDLR-202ENST00000382099 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 OBP2AQ9NY56 170 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 CT45A6P0DMU7 189 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 CT45A5P0DMU8 189 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 CT45A7P0DMV0 189 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 GPR12P47775 334 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 ODF1Q14990 250 aa12.37□□□□□ -0.43
VLDLR-202ENST00000382099 CT45A1Q5HYN5 189 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms