RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TMEM187Q14656 261 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 PHLDA2Q53GA4 152 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 LEMD1Q68G75 181 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 TOMM20LQ6UXN7 152 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 FAM24BQ8N5W8 94 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 OR5H2Q8NGV7 314 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 OR6F1Q8NGZ6 308 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 ST8SIA2Q92186 375 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 S100A16Q96FQ6 103 aaKnown RBP10.05□□□□□ -0.8
CXCL12-202ENST00000374426 SEC22AQ96IW7 307 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 MS4A6AQ9H2W1 248 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 VSIRQ9H7M9 311 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 APLNQ9ULZ1 77 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 GNG7O60262 68 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 TMEM127O75204 238 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 DFFBO76075 338 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 CD5P06127 495 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 TAS2R20P59543 309 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 DEFB131AP59861 70 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 LYSMD2Q8IV50 215 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 Q8NAQ8 132 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
CXCL12-202ENST00000374426 GINS3Q9BRX5 216 aa10.04□□□□□ -0.8
CXCL12-202ENST00000374426 YTHDF1Q9BYJ9 559 aaKnown RBP10.04□□□□□ -0.8
CXCL12-202ENST00000374426 FAM212BQ9NTI7 297 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-202ENST00000374426 IGHV3-66A0A0C4DH42 116 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 IGLL5B9A064 214 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
CXCL12-202ENST00000374426 ST8SIA3O43173 380 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
CXCL12-202ENST00000374426 HRH1P35367 487 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 TGFBR1P36897 503 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 UBE2NLQ5JXB2 153 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 TMEM69Q5SWH9 247 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 H2BFWTQ7Z2G1 175 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 OR4A16Q8NH70 328 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 HRH4Q9H3N8 390 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 ZFAND3Q9H8U3 227 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 AGRNO00468 2067 aa10.03□□□□□ -0.8
CXCL12-202ENST00000374426 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
CXCL12-202ENST00000374426 C11orf94C9JXX5 98 aa10.02□□□□□ -0.81
CXCL12-202ENST00000374426 EIF4EP06730 217 aaKnown RBP10.02□□□□□ -0.81
CXCL12-202ENST00000374426 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
CXCL12-202ENST00000374426 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
CXCL12-202ENST00000374426 HLA-DMAP28067 261 aa10.02□□□□□ -0.81
CXCL12-202ENST00000374426 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
CXCL12-202ENST00000374426 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
CXCL12-202ENST00000374426 SAMD12Q8N8I0 201 aa10.02□□□□□ -0.81
CXCL12-202ENST00000374426 MRGPRFQ96AM1 343 aa10.02□□□□□ -0.81
CXCL12-202ENST00000374426 PUS1Q9Y606 427 aaKnown RBP eCLIP10.02□□□□□ -0.81
CXCL12-202ENST00000374426 DNAH11Q96DT5 4516 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 A0A1B0GU03 582 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 PRSS3P35030 304 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 NPBWR1P48145 328 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 RPL11P62913 178 aaKnown RBP10.01□□□□□ -0.81
CXCL12-202ENST00000374426 ERHP84090 104 aaKnown RBP10.01□□□□□ -0.81
CXCL12-202ENST00000374426 NEDD8Q15843 81 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 IZUMO4Q1ZYL8 232 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 SPINK9Q5DT21 86 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 ZNF600Q6ZNG1 722 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 CROCCP3Q8IVE0 287 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 DUSP18Q8NEJ0 188 aa10.01□□□□□ -0.81
CXCL12-202ENST00000374426 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
CXCL12-202ENST00000374426 HLA-DMBP28068 263 aa10□□□□□ -0.81
CXCL12-202ENST00000374426 S100GP29377 79 aa10□□□□□ -0.81
CXCL12-202ENST00000374426 RPS19P39019 145 aaKnown RBP10□□□□□ -0.81
CXCL12-202ENST00000374426 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
CXCL12-202ENST00000374426 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
CXCL12-202ENST00000374426 STHQ8IWL8 128 aa10□□□□□ -0.81
CXCL12-202ENST00000374426 RABAC1Q9UI14 185 aa10□□□□□ -0.81
CXCL12-202ENST00000374426 ZNF705EA8MWA4 302 aaPredicted RBP9.99□□□□□ -0.81
CXCL12-202ENST00000374426 TMEM50AO95807 157 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 C4BPBP20851 252 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 TSPAN5P62079 268 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 PVRIGQ6DKI7 326 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 Q6ZTC4 211 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 GPX8Q8TED1 209 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 Q9H521 79 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 X6R8D5 127 aa9.99□□□□□ -0.81
CXCL12-202ENST00000374426 A0A0B4J293 547 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 INS-IGF2F8WCM5 200 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 K7EQG2 157 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 P0C879 139 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 MIFP14174 115 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 NPPCP23582 126 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 SNCAP37840 140 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 UCP3P55916 312 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 STXBP6Q8NFX7 210 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 TMEM231Q9H6L2 316 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 MRPL36Q9P0J6 103 aaKnown RBP9.98□□□□□ -0.81
CXCL12-202ENST00000374426 PKD1P98161 4303 aa9.98□□□□□ -0.81
CXCL12-202ENST00000374426 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 IGHV4-4A0A075B6R2 117 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms