RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CRYBB3P26998 211 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 CHD5Q8TDI0 1954 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 TBX6O95947 436 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 EPDR1Q9UM22 224 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 ZNF479Q96JC4 524 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 NYNRINQ9P2P1 1898 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 GREB1Q4ZG55 1949 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 A0A1W2PS18 150 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 PINLYPA6NC86 204 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-201ENST00000372189 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 METTL26Q96S19 204 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 ZSWIM8A7E2V4 1837 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 HOXA5P20719 270 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 HSD52Q0P140 79 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 C19orf54Q5BKX5 351 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 RLFQ13129 1914 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 CDKN1AP38936 164 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 HCP5Q6MZN7 132 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 GPHA2Q96T91 129 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 TUBA4BQ9H853 241 aa11.22□□□□□ -0.61
RAPGEF1-201ENST00000372189 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 MLNRO43193 412 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 GCHFRP30047 84 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 ATP5G2Q06055 141 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 WNT9BO14905 357 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 KLHDC3Q9BQ90 382 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 hCG_38984A0A1B0GV85 526 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 WNT10AQ9GZT5 417 aa11.21□□□□□ -0.61
RAPGEF1-201ENST00000372189 THADAQ6YHU6 1953 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 IGKV1D-43A0A0B4J1Z2 117 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 PSG9Q00887 426 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 LINC00114Q6XXX2 140 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 C1QTNF5Q9BXJ0 243 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 AZU1P20160 251 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 ZNF56Q15929 161 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.62
RAPGEF1-201ENST00000372189 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 RNF222A6NCQ9 220 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 CELA3BP08861 270 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 RCC1LQ96I51 464 aaKnown RBP11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 C17orf100A8MU93 164 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 PF4P02776 101 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 CBLN1P23435 193 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 CDKN1BP46527 198 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 RND2P52198 227 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 DNM1P46Q6ZS02 220 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 CRYBA2P53672 197 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 TSSC4Q9Y5U2 329 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 GPX4P36969 197 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 HBBP68871 147 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 CENPWQ5EE01 88 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 IL36BQ9NZH7 164 aa11.2□□□□□ -0.62
RAPGEF1-201ENST00000372189 TCF24Q7RTU0 167 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 RNASEH2CQ8TDP1 164 aaKnown RBP11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 ST6GALNAC6Q969X2 333 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 TM2D1Q9BX74 207 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 LAMTOR3Q9UHA4 124 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 ZNF146Q15072 292 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 TCF19Q9Y242 345 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 CT83Q5H943 113 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 SYT8Q8NBV8 401 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 NABP2Q9BQ15 211 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 DOCK6Q96HP0 2047 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 CA7P43166 264 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 C1orf122Q6ZSJ8 110 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 TRAV12-3A0A0B4J271 114 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 GNLYP22749 145 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 PSG7Q13046 419 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 C2orf83Q53S99 150 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 C7orf69Q9H7B7 122 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
RAPGEF1-201ENST00000372189 TM4SF5O14894 197 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms