RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 RBMXL2O75526 392 aaKnown RBP8.39□□□□□ -1.07
COL5A1-202ENST00000371820 PRDX2P32119 198 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
COL5A1-202ENST00000371820 EIF4EBP1Q13541 118 aaPredicted RBP8.39□□□□□ -1.07
COL5A1-202ENST00000371820 PDLIM3Q53GG5 364 aaPredicted RBP8.39□□□□□ -1.07
COL5A1-202ENST00000371820 PRR18Q8N4B5 295 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 ZNRF1Q8ND25 227 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 OR4F5Q8NH21 305 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 OR4A16Q8NH70 328 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 OR2D2Q9H210 308 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 OR6C3Q9NZP0 311 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 ZMAT5Q9UDW3 170 aaKnown RBP8.39□□□□□ -1.07
COL5A1-202ENST00000371820 TRRAPQ9Y4A5 3859 aa8.39□□□□□ -1.07
COL5A1-202ENST00000371820 ODAMA1E959 279 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 ZNF729A6NN14 1252 aaPredicted RBP8.38□□□□□ -1.07
COL5A1-202ENST00000371820 PPP5D1E7EU14 171 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 H3BP45 60 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 H7BYZ3 331 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 NPFFO15130 113 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 CLN5O75503 358 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 KRASP01116 189 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 FGF7P21781 194 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 GPR12P47775 334 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 UBE2E1P51965 193 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 RPL31P62899 125 aaKnown RBP8.38□□□□□ -1.07
COL5A1-202ENST00000371820 FFAR4Q5NUL3 377 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 OR8G2PQ6IF36 304 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 CD177Q8N6Q3 437 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 Q8N7P7 452 aa8.38□□□□□ -1.07
COL5A1-202ENST00000371820 SOX21Q9Y651 276 aaPredicted RBP8.38□□□□□ -1.07
COL5A1-202ENST00000371820 A0A0U1RQK1 487 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 A0A1W2PPE3 182 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 PMS2P5A8MQ11 134 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BKO60814 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 GCGP01275 180 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 TFF1P04155 84 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BJP06899 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 PFN1P07737 140 aaKnown RBP8.37□□□□□ -1.07
COL5A1-202ENST00000371820 MDKP21741 143 aaPredicted RBP8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BOP23527 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 CD1BP29016 333 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BBP33778 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 OPRK1P41145 380 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BDP58876 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BCP62807 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 ARL16Q0P5N6 197 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST2H2BEQ16778 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 LBHQ53QV2 105 aaPredicted RBP8.37□□□□□ -1.07
COL5A1-202ENST00000371820 COA6Q5JTJ3 125 aaKnown RBP8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.37□□□□□ -1.07
COL5A1-202ENST00000371820 SLC16A13Q7RTY0 426 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 RPP25LQ8N5L8 163 aaKnown RBP8.37□□□□□ -1.07
COL5A1-202ENST00000371820 OR5R1Q8NH85 324 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BHQ93079 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 S1PR3Q99500 378 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BNQ99877 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H2BMQ99879 126 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 NPVFQ9HCQ7 196 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 TNFRSF19Q9NS68 423 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 GFOD1Q9NXC2 390 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
COL5A1-202ENST00000371820 UBE2L5PA0A1B0GUS4 154 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 NXPH3O95157 252 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 NDUFA7O95182 113 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 HRASP01112 189 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 TRGC2P03986 189 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 TYMSP04818 313 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 CXCL1P09341 107 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 TRGC1P0CF51 173 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 SAA4P35542 130 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 G6PCP35575 357 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 IER3P46695 156 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 GALR1P47211 349 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 CDC34P49427 236 aaPredicted RBP8.36□□□□□ -1.07
COL5A1-202ENST00000371820 AESQ08117 197 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 HNF4GQ14541 408 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 ZNF726P1Q15940 193 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 RTL8BQ17RB0 113 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 COX19Q49B96 90 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 OR2T10Q8NGZ9 312 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 RNASEH2CQ8TDP1 164 aaKnown RBP8.36□□□□□ -1.07
COL5A1-202ENST00000371820 TNFRSF14Q92956 283 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 RAB24Q969Q5 203 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 R3HDM4Q96D70 268 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 NPCDR1Q9BY65 106 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 ENY2Q9NPA8 101 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 FKBP11Q9NYL4 201 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 LY96Q9Y6Y9 160 aa8.36□□□□□ -1.07
COL5A1-202ENST00000371820 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 MARCH11A6NNE9 402 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 TSTD3H0UI37 97 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 F2RL2O00254 374 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 PSPNO60542 156 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms