RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 IGKV1D-13A0A0B4J2D9 117 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 A0A0J9YWU9 116 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 MFSD2BA6NFX1 497 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 IFITM5A6NNB3 132 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 LGALS9O00182 355 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 CASQ2O14958 399 aaPredicted RBP3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 KBTBD11O94819 623 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 DIRAS3O95661 229 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGKV1-13P0DP09 117 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 CD36P16671 472 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 CRHBPP24387 322 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 PSMA1P25786 263 aaKnown RBP3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 RPL27AP46776 148 aaKnown RBP3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 PSMD7P51665 324 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 MLLT11Q13015 90 aaPredicted RBP3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRAM1Q15629 374 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 FAM106AQ4KMX7 169 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 UNQ9165/PRO28630Q6UXU0 137 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 SSX9Q7RTT3 188 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 GPHB5Q86YW7 130 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZNF645Q8N7E2 425 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR4S2Q8NH73 311 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 TCTEX1D2Q8WW35 142 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 EEF1AKMT3Q96AZ1 226 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR2A7Q96R45 310 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 MGLLQ99685 303 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 GFRA4Q9GZZ7 299 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 ATG5Q9H1Y0 275 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR51E2Q9H255 320 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 VCXQ9H320 206 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 ACOT13Q9NPJ3 140 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 SLC2A9Q9NRM0 540 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 TAS2R8Q9NYW2 309 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 UBQLN2Q9UHD9 624 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 RBMX2Q9Y388 322 aaKnown RBP3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 TPRKBQ9Y3C4 175 aa3.82□□□□□ -1.8
RNU4-4P-201ENST00000364588 METTL21EPA6NDL7 271 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 NUPR2A6NF83 97 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 TMEM235A6NFC5 223 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 A8MWP6 167 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 ANKRD65E5RJM6 399 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 PDCD5O14737 125 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 TNFSF12O43508 249 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 DEDDO75618 318 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 DHFRP00374 187 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 HLA-DQB1P01920 261 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 CRYGCP07315 174 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZNF735P0CB33 412 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 DEFA4P12838 97 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 RPA2P15927 270 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 CTRB1P17538 263 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 RAB3BP20337 219 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 DTYMKP23919 212 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 MYL9P24844 172 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 PSMB6P28072 239 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 GPR183P32249 361 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 RANBP1P43487 201 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 CAMPP49913 170 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 AQP4P55087 323 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 UBE2V1Q13404 147 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 SSX1Q16384 188 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 DEFB135Q30KP9 77 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 ANKRD55Q3KP44 614 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 CDNFQ49AH0 187 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 CTRB2Q6GPI1 263 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR4A47Q6IF82 309 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 RBPMS2Q6ZRY4 209 aaKnown RBP3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 Q6ZS49 121 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 LYG2Q86SG7 212 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 PUSL1Q8N0Z8 303 aaKnown RBP3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 RPP25LQ8N5L8 163 aaKnown RBP3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 OR1L6Q8NGR2 347 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 VSTM2AQ8TAG5 236 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 DUSP21Q9H596 190 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 HRASLSQ9HDD0 168 aa3.81□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGLV11-55A0A075B6I3 123 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 IGHV3OR16-8A0A075B7F1 116 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRBV7-1A0A0A6YYK4 115 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 TRAV1-2A0A0B4J238 106 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 SSX5O60225 188 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 S1PR2O95136 353 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 HRASP01112 189 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 FCER2P06734 321 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 PTHLHP12272 177 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 HIST1H1BP16401 226 aaKnown RBP3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 HLA-GP17693 338 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 RPL35AP18077 110 aaKnown RBP3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 BMI1P35226 326 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 MAS1LP35410 378 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 APOC4P55056 127 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 GNG2P59768 71 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 TNFRSF9Q07011 255 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 EIF4EBP1Q13541 118 aaPredicted RBP3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 TIMM50Q3ZCQ8 353 aa3.8□□□□□ -1.8
RNU4-4P-201ENST00000364588 ZC2HC1BQ5TFG8 222 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms