RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 TRAV1-1A0A0B4J248 108 aa16.66■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FGF7P21781 194 aa16.66■□□□□ 0.26
MAP1LC3A-201ENST00000360668 PVRIGQ6DKI7 326 aa16.66■□□□□ 0.26
MAP1LC3A-201ENST00000360668 RSG1Q9BU20 258 aa16.66■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SMDT1Q9H4I9 107 aa16.66■□□□□ 0.26
MAP1LC3A-201ENST00000360668 MPDU1O75352 247 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FSHBP01225 129 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 HLA-DRB1P01911 266 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 HBE1P02100 147 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 H2AFB1P0C5Y9 115 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 AREGP15514 252 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 RAB2AP61019 212 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SSMEM1Q8WWF3 244 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SSX3Q99909 188 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 RASL11BQ9BPW5 248 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 NPVFQ9HCQ7 196 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 FBXO7Q9Y3I1 522 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 RFNGQ9Y644 331 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 ITPR3Q14573 2671 aa16.65■□□□□ 0.26
MAP1LC3A-201ENST00000360668 SMCO3A2RU48 225 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 MBP02144 154 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 REG1AP05451 166 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 GPX4P36969 197 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 FHITP49789 147 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CX3CL1P78423 397 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 ARSJQ5FYB0 599 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 OR1P1Q8NH06 330 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 NANPQ8TBE9 248 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CACNG8Q8WXS5 425 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 RBM14Q96PK6 669 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TEP1Q99973 2627 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 NAV3Q8IVL0 2385 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CD69Q07108 199 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 PEA15Q15121 130 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 C10orf91Q5T1B1 145 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TREML4Q6UXN2 200 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 ABHD5Q8WTS1 349 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 MBD3L1Q8WWY6 194 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 ARPC1AQ92747 370 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 NPCDR1Q9BY65 106 aa16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SOX21Q9Y651 276 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3A-201ENST00000360668 C17orf112F2Z3M2 114 aa16.63■□□□□ 0.25
MAP1LC3A-201ENST00000360668 PBDC1Q9BVG4 233 aa16.63■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TREM1Q9NP99 234 aa16.63■□□□□ 0.25
MAP1LC3A-201ENST00000360668 MOB4Q9Y3A3 225 aa16.63■□□□□ 0.25
MAP1LC3A-201ENST00000360668 F11RQ9Y624 299 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3A-201ENST00000360668 F8P00451 2351 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 IGHV7-81A0A0B4J1V7 117 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TMEM41BQ5BJD5 291 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SPSB3Q6PJ21 355 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 C9orf139Q6ZV77 190 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CIARTQ8N365 385 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 ZNF709Q8N972 641 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SLC25A33Q9BSK2 321 aa16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 LSM4Q9Y4Z0 139 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CORTO00230 105 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 APELAP0DMC3 54 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 NDPQ00604 133 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SLC16A13Q7RTY0 426 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 C5orf56Q8N8D9 126 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SCRT1Q9BWW7 348 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SEC11CQ9BY50 192 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 RPRMQ9NS64 109 aa16.61■□□□□ 0.25
MAP1LC3A-201ENST00000360668 A6NDX4 124 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 H3BUX3 64 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CTRB1P17538 263 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SRSF3P84103 164 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 AKR1C1Q04828 323 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 GUK1Q16774 197 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CTRB2Q6GPI1 263 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TEPPQ6URK8 271 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TMEM144Q7Z5S9 345 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 NARS2Q96I59 477 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CARHSP1Q9Y2V2 147 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 ABCA1O95477 2261 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 AGPAT2O15120 278 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TSPAN9O75954 239 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CRYGCP07315 174 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 MFAP2P55001 183 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 PMS2P11Q13670 270 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 GAMTQ14353 236 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 ETFRF1Q6IPR1 90 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TMEM219Q86XT9 240 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 OR1L6Q8NGR2 347 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SLC35E1Q96K37 410 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 FAM103A1Q9BTL3 118 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 PITPNC1Q9UKF7 332 aa16.6■□□□□ 0.25
MAP1LC3A-201ENST00000360668 NPIPB5A8MRT5 1133 aa16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SMAD7O15105 426 aaKnown RBP16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 OPRK1P41145 380 aa16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 RAB31Q13636 194 aa16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 TEX29Q8N6K0 151 aa16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 SFT2D1Q8WV19 159 aa16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 MGST2Q99735 147 aa16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 FNDC4Q9H6D8 234 aaPredicted RBP16.59■□□□□ 0.25
MAP1LC3A-201ENST00000360668 CSPG4Q6UVK1 2322 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 ZANQ9Y493 2812 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 EGR2P11161 476 aaPredicted RBP16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 MLANAQ16655 118 aa16.58■□□□□ 0.24
MAP1LC3A-201ENST00000360668 DEFB112Q30KQ8 113 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms