RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 LINC00527Q9UJ94 153 aa17.22■□□□□ 0.35
HOXA4-201ENST00000360046 CUBNO60494 3623 aa17.22■□□□□ 0.35
HOXA4-201ENST00000360046 G3V318 75 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 TRIM77I1YAP6 450 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 FBXO24O75426 580 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 ARSJQ5FYB0 599 aaPredicted RBP17.21■□□□□ 0.35
HOXA4-201ENST00000360046 RPL7L1Q6DKI1 246 aaKnown RBP17.21■□□□□ 0.35
HOXA4-201ENST00000360046 TTC9CQ8N5M4 171 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 MISP3Q96FF7 219 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 ATP5SQ99766 215 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 PRSS22Q9GZN4 317 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 TRAV41A0A0B4J266 112 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 DFFBO76075 338 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 CRYGCP07315 174 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 MFAP2P55001 183 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 SLC25A24Q6NUK1 477 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 CYTL1Q9NRR1 136 aa17.21■□□□□ 0.35
HOXA4-201ENST00000360046 FN1P02751 2386 aaKnown RBP17.21■□□□□ 0.34
HOXA4-201ENST00000360046 BORCS7-ASMTA0A0B4J1R7 106 aa17.2■□□□□ 0.34
HOXA4-201ENST00000360046 PRSS46E5RG02 174 aa17.2■□□□□ 0.34
HOXA4-201ENST00000360046 PRH1P02810 166 aa17.2■□□□□ 0.34
HOXA4-201ENST00000360046 AKIRIN2Q53H80 203 aa17.2■□□□□ 0.34
HOXA4-201ENST00000360046 SLC51BQ86UW2 128 aa17.2■□□□□ 0.34
HOXA4-201ENST00000360046 RNASEH2CQ8TDP1 164 aaKnown RBP17.2■□□□□ 0.34
HOXA4-201ENST00000360046 TMEM68Q96MH6 324 aa17.2■□□□□ 0.34
HOXA4-201ENST00000360046 SMCO3A2RU48 225 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 AP4M1O00189 453 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 IGF1P05019 195 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 OPRK1P41145 380 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 HILS1P60008 231 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 ZNF266Q14584 549 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 FAM110DQ8TAY7 271 aaPredicted RBP17.19■□□□□ 0.34
HOXA4-201ENST00000360046 NOL4LQ96MY1 436 aaPredicted RBP17.19■□□□□ 0.34
HOXA4-201ENST00000360046 TMEM147Q9BVK8 224 aa17.19■□□□□ 0.34
HOXA4-201ENST00000360046 UBE2L5PA0A1B0GUS4 154 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 CLDN34H7C241 214 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 JTBO76095 146 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 CRIP2P52943 208 aaPredicted RBP17.18■□□□□ 0.34
HOXA4-201ENST00000360046 ATP6V1FQ16864 119 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 TMEM95Q3KNT9 176 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 OR1L6Q8NGR2 347 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 JMJD8Q96S16 334 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 UQCC1Q9NVA1 299 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 DMRT1Q9Y5R6 373 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 FAM181BA6NEQ2 426 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 CORTO00230 105 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 CYB5BO43169 146 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 DLK1P80370 383 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 ZNF355PQ9NSJ1 428 aa17.18■□□□□ 0.34
HOXA4-201ENST00000360046 IFNA5P01569 189 aa17.17■□□□□ 0.34
HOXA4-201ENST00000360046 UBA52P62987 128 aaKnown RBP17.17■□□□□ 0.34
HOXA4-201ENST00000360046 CD69Q07108 199 aa17.17■□□□□ 0.34
HOXA4-201ENST00000360046 PVRIGQ6DKI7 326 aa17.17■□□□□ 0.34
HOXA4-201ENST00000360046 GGACTQ9BVM4 153 aa17.17■□□□□ 0.34
HOXA4-201ENST00000360046 ZNF702PQ9H963 129 aa17.17■□□□□ 0.34
HOXA4-201ENST00000360046 TPT1P13693 172 aaKnown RBP17.16■□□□□ 0.34
HOXA4-201ENST00000360046 MLANAQ16655 118 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 SLC16A13Q7RTY0 426 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 ST8SIA2Q92186 375 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 TCF21O43680 179 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 IGHV3-48P01763 117 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 EIF5AP63241 154 aaKnown RBP17.16■□□□□ 0.34
HOXA4-201ENST00000360046 EXOSC2Q13868 293 aaKnown RBP17.16■□□□□ 0.34
HOXA4-201ENST00000360046 UBAC2Q8NBM4 344 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 HSD17B11Q8NBQ5 300 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 STOML3Q8TAV4 291 aa17.16■□□□□ 0.34
HOXA4-201ENST00000360046 FNDC4Q9H6D8 234 aaPredicted RBP17.16■□□□□ 0.34
HOXA4-201ENST00000360046 IGLV11-55A0A075B6I3 123 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 IGHV3-21A0A0B4J1V1 117 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 MT-CO2P00403 227 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 RNASE1P07998 156 aaKnown RBP17.15■□□□□ 0.34
HOXA4-201ENST00000360046 GPX4P36969 197 aaPredicted RBP17.15■□□□□ 0.34
HOXA4-201ENST00000360046 AKR1C1Q04828 323 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 VWC2Q2TAL6 325 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 C19orf54Q5BKX5 351 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 SLC35E1Q96K37 410 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 FANCD2OSQ96PS1 177 aa17.15■□□□□ 0.34
HOXA4-201ENST00000360046 NIPBLQ6KC79 2804 aaeCLIP17.14■□□□□ 0.33
HOXA4-201ENST00000360046 RPS10-NUDT3A0A1W2PQS6 291 aa17.14■□□□□ 0.33
HOXA4-201ENST00000360046 CRYBA1P05813 215 aa17.14■□□□□ 0.33
HOXA4-201ENST00000360046 ETFRF1Q6IPR1 90 aa17.14■□□□□ 0.33
HOXA4-201ENST00000360046 BAP18Q8IXM2 172 aa17.14■□□□□ 0.33
HOXA4-201ENST00000360046 SCGB1C1Q8TD33 95 aa17.14■□□□□ 0.33
HOXA4-201ENST00000360046 CACNG8Q8WXS5 425 aa17.14■□□□□ 0.33
HOXA4-201ENST00000360046 SOX15O60248 233 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 GAMTQ14353 236 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 OR2T6Q8NHC8 308 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 ACY3Q96HD9 319 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 THYN1Q9P016 225 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 OR2J3O76001 311 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 HIST1H1BP16401 226 aaKnown RBP17.13■□□□□ 0.33
HOXA4-201ENST00000360046 FGF7P21781 194 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 DEFA5Q01523 94 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 TAF15Q92804 592 aaKnown RBP eCLIP17.13■□□□□ 0.33
HOXA4-201ENST00000360046 MS4A10Q96PG2 267 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 WDR61Q9GZS3 305 aaKnown RBP17.13■□□□□ 0.33
HOXA4-201ENST00000360046 NPVFQ9HCQ7 196 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 ZNF580Q9UK33 172 aa17.13■□□□□ 0.33
HOXA4-201ENST00000360046 I3L2K1 104 aa17.12■□□□□ 0.33
HOXA4-201ENST00000360046 CFDP00746 253 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms