RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 IGHV1-8P0DP01 117 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 FABP4P15090 132 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 VMA21Q3ZAQ7 101 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 OR10G8Q8NGN5 311 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 OR1P1Q8NH06 330 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 TNFRSF14Q92956 283 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 FAM122AQ96E09 287 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 IGHV2-70P01814 119 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 LGALS7P47929 136 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 CASP6P55212 293 aa18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 MRPL32Q9BYC8 188 aaKnown RBP18.03■□□□□ 0.48
NKX2-1-201ENST00000354822 PGPEP1LA6NFU8 196 aa18.02■□□□□ 0.48
NKX2-1-201ENST00000354822 IGLV2-23P01705 113 aa18.02■□□□□ 0.48
NKX2-1-201ENST00000354822 TEX38Q6PEX7 206 aa18.02■□□□□ 0.48
NKX2-1-201ENST00000354822 SGMS2Q8NHU3 365 aa18.02■□□□□ 0.48
NKX2-1-201ENST00000354822 A0A0U1RQK1 487 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 ZNF320A2RRD8 509 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 XKRY2A2RUG3 117 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 MLANAQ16655 118 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 HIST1H2BLQ99880 126 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 TMEM133Q9H2Q1 129 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 LINC00587B1AMM8 73 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 PDLIM4P50479 330 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 DIAPH2-AS1Q14236 149 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 SSX2Q16385 188 aa18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 PACRGQ96M98 296 aaPredicted RBP18.01■□□□□ 0.47
NKX2-1-201ENST00000354822 TRAV9-1A0A075B6T8 112 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18■□□□□ 0.47
NKX2-1-201ENST00000354822 FSTL3O95633 263 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 C8orf88P0DMB2 117 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 PFDN5Q99471 154 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 SLC25A33Q9BSK2 321 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 ZNF430Q9H8G1 570 aaPredicted RBP18■□□□□ 0.47
NKX2-1-201ENST00000354822 RALYQ9UKM9 306 aaKnown RBP18■□□□□ 0.47
NKX2-1-201ENST00000354822 PTPRQQ9UMZ3 2332 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 E7EUB6 86 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 MRPL41Q8IXM3 137 aaKnown RBP18■□□□□ 0.47
NKX2-1-201ENST00000354822 TMEM37Q8WXS4 190 aa18■□□□□ 0.47
NKX2-1-201ENST00000354822 OR7C2O60412 319 aa17.99■□□□□ 0.47
NKX2-1-201ENST00000354822 GATA2P23769 480 aaPredicted RBP17.99■□□□□ 0.47
NKX2-1-201ENST00000354822 WT1-ASQ06250 92 aa17.99■□□□□ 0.47
NKX2-1-201ENST00000354822 C11orf42Q8N5U0 333 aa17.99■□□□□ 0.47
NKX2-1-201ENST00000354822 DNAJC4Q9NNZ3 241 aa17.99■□□□□ 0.47
NKX2-1-201ENST00000354822 A0A1W2PRE2 83 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 HELTA6NFD8 242 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 PPOXP50336 477 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 PRRX1P54821 245 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 OR2T6Q8NHC8 308 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 EAF1Q96JC9 268 aaPredicted RBP17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 PCNX1Q96RV3 2341 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 CGB1A6NKQ9 187 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 RPL15P61313 204 aaKnown RBP17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 FBXL19-AS1Q494R0 122 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 ZNF503Q96F45 646 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 TRAPPC1Q9Y5R8 145 aa17.98■□□□□ 0.47
NKX2-1-201ENST00000354822 HIST1H1BP16401 226 aaKnown RBP17.97■□□□□ 0.47
NKX2-1-201ENST00000354822 TEX45Q8NA69 505 aa17.97■□□□□ 0.47
NKX2-1-201ENST00000354822 ROS1P08922 2347 aa17.97■□□□□ 0.47
NKX2-1-201ENST00000354822 KLRB1Q12918 225 aa17.97■□□□□ 0.47
NKX2-1-201ENST00000354822 OR1L4Q8NGR5 311 aa17.97■□□□□ 0.47
NKX2-1-201ENST00000354822 IL36BQ9NZH7 164 aa17.97■□□□□ 0.47
NKX2-1-201ENST00000354822 PSMB11A5LHX3 300 aa17.96■□□□□ 0.47
NKX2-1-201ENST00000354822 SLC25A17O43808 307 aa17.96■□□□□ 0.47
NKX2-1-201ENST00000354822 CA7P43166 264 aa17.96■□□□□ 0.47
NKX2-1-201ENST00000354822 SELENOTP62341 195 aa17.96■□□□□ 0.47
NKX2-1-201ENST00000354822 K7EN84 100 aa17.96■□□□□ 0.46
NKX2-1-201ENST00000354822 GNG4P50150 75 aa17.96■□□□□ 0.46
NKX2-1-201ENST00000354822 CNN1P51911 297 aaKnown RBP17.96■□□□□ 0.46
NKX2-1-201ENST00000354822 ETFRF1Q6IPR1 90 aa17.96■□□□□ 0.46
NKX2-1-201ENST00000354822 ENSAO43768 121 aaKnown RBP17.95■□□□□ 0.46
NKX2-1-201ENST00000354822 HNF1AP20823 631 aa17.95■□□□□ 0.46
NKX2-1-201ENST00000354822 CRYBB3P26998 211 aa17.95■□□□□ 0.46
NKX2-1-201ENST00000354822 MUC15Q8N387 334 aa17.95■□□□□ 0.46
NKX2-1-201ENST00000354822 THAP8Q8NA92 274 aa17.95■□□□□ 0.46
NKX2-1-201ENST00000354822 TCRBV4S1A1TA0A5B7 111 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 MMD2Q8IY49 270 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 FNDC4Q9H6D8 234 aaPredicted RBP17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 ARFGEF3Q5TH69 2177 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 RBP4P02753 201 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 AMBPP02760 352 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 YPEL3P61236 119 aaPredicted RBP17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 ZNF90Q03938 601 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 C10orf55Q5SWW7 151 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 LINC01560Q8TB33 94 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 NPIPB3Q92617 1050 aa17.94■□□□□ 0.46
NKX2-1-201ENST00000354822 IGHV2-26A0A0B4J1V2 119 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 PLAUP00749 431 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 IGLV1-47P01700 117 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 BPIFB3P59826 476 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 ST6GALNAC3Q8NDV1 305 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 FAM167A-AS1Q96KT0 104 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 ATMQ13315 3056 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 A0A1W2PPI3 338 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 COX7A2P2O60397 106 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 OR10J4P0C629 311 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 BEND2Q8NDZ0 799 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 SLC25A2Q9BXI2 301 aa17.93■□□□□ 0.46
NKX2-1-201ENST00000354822 ERVFC1-1P60608 527 aa17.92■□□□□ 0.46
NKX2-1-201ENST00000354822 SUMO1P63165 101 aaKnown RBP17.92■□□□□ 0.46
NKX2-1-201ENST00000354822 JOSD1Q15040 202 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms