RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SCGB1C1Q8TD33 95 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 C2orf15Q8WU43 125 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ORAOV1Q8WV07 137 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 L3HYPDHQ96EM0 354 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ALX4Q9H161 411 aaPredicted RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 IFI27L2Q9H2X8 130 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TCEAL2Q9H3H9 227 aaPredicted RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TPT1P8Q9HAU6 139 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 C14orf105Q9NVL8 296 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 GLTPQ9NZD2 209 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SCP2D1Q9UJQ7 156 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ANGPT4Q9Y264 503 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NAIPQ13075 1403 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PRRC2AP48634 2157 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 RNF213Q63HN8 5207 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 LRP1Q07954 4544 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 A0A1B0GVG6 124 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 C20orf202A1L168 122 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 A6NED7 52 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TCF21O43680 179 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 RPP14O95059 124 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 KRTAP1-4P0C5Y4 121 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ATF1P18846 271 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PPIBP23284 216 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CMPK1P30085 196 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CCR7P32248 378 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 HERVK_113P63121 156 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC35A2P78381 396 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PDK2Q15119 407 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CDK10Q15131 360 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PLECQ15149 4684 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 MAPK14Q16539 360 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SPANXN3Q5MJ09 141 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 HIST2H3PS2Q5TEC6 136 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TBPL2Q6SJ96 375 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 DAZ4Q86SG3 579 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 OR2T35Q8NGX2 323 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PIGXQ8TBF5 258 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 LMX1AQ8TE12 382 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 BORCS7Q96B45 105 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ISOC1Q96CN7 298 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SMIM12Q96EX1 92 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 S100A16Q96FQ6 103 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NSD1Q96L73 2696 aaPredicted RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 DAZ1Q9NQZ3 744 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC2A9Q9NRM0 540 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TXNL4BQ9NX01 149 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ZNRD1Q9P1U0 126 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 GOLGA4Q13439 2230 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CASKIN1Q8WXD9 1431 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 A0A087WUJ7 227 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SMIM9A6NGZ8 99 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CPSF4LA6NMK7 179 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 A8MWP4 228 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CREBL2O60519 120 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 IGKV1D-33P01593 117 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 IGKV1-33P01594 117 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 FABP1P07148 127 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SCGB1C2P0DMR2 95 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CBR1P16152 277 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CFL1P23528 166 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MIPP30301 263 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PPP1CCP36873 323 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PSMB3P49720 205 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TAF6P49848 677 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 FXYD6P3P58550 94 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PPP3R1P63098 170 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM176BQ3YBM2 270 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF658BQ4V348 819 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 C1orf194Q5T5A4 169 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 Q5W150 140 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 VN1R4Q7Z5H5 301 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 NT5DC3Q86UY8 548 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OOSP2Q86WS3 158 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SNX29P2Q8IUI4 249 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MKXQ8IYA7 352 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TCTE3Q8IZS6 198 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 STAG3L4Q8TBR4 150 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ASB17Q8WXJ9 295 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 EXOSC8Q96B26 276 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 YPEL4Q96NS1 127 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OR52E6Q96RD3 313 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RNF5Q99942 180 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MED18Q9BUE0 208 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM109Q9BVC6 243 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PARP12Q9H0J9 701 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ABCG5Q9H222 651 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TXNIPQ9H3M7 391 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SMCO4Q9NRQ5 59 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PRR34Q9NV39 138 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 COQ4Q9Y3A0 265 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PRELID3BQ9Y3B1 194 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ADAMTS9Q9P2N4 1935 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM2Q9UHN6 1383 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 A0A1B0GV50 99 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 IZUMO1RA6ND01 250 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RIIAD1A6NNX1 92 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ARPC5O15511 151 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms