RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ICAM4Q14773 271 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 NAT1P18440 290 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 RNF212Q495C1 297 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 KLF17Q5JT82 389 aaPredicted RBP11.31□□□□□ -0.6
SMC6-201ENST00000351948 ANAPC16Q96DE5 110 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 AMTP48728 403 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 CRISP2P16562 243 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 SUPT4H1P63272 117 aaKnown RBP11.3□□□□□ -0.6
SMC6-201ENST00000351948 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
SMC6-201ENST00000351948 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
SMC6-201ENST00000351948 FOXI3A8MTJ6 420 aaPredicted RBP11.3□□□□□ -0.6
SMC6-201ENST00000351948 NHLRC3Q5JS37 347 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 LHFPL5Q8TAF8 219 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 GCHFRP30047 84 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
SMC6-201ENST00000351948 TOMM20LQ6UXN7 152 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
SMC6-201ENST00000351948 LINC00473A8K010 186 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 DLX6P56179 175 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 LAMTOR1Q6IAA8 161 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 PUSL1Q8N0Z8 303 aaKnown RBP11.29□□□□□ -0.6
SMC6-201ENST00000351948 MFSD2BA6NFX1 497 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 H3BUX3 64 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 NDUFS7O75251 213 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 DGAT2L7PQ6IED9 249 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 WDR86Q86TI4 376 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 STPG2Q8N412 459 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 LOC389332A0A1B0GUA5 103 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 RHOGP84095 191 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 RIGQ13278 110 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 TWIST1Q15672 202 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 TCAPO15273 167 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 MPZP25189 248 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 LHFPL1Q86WI0 220 aa11.29□□□□□ -0.6
SMC6-201ENST00000351948 ELOA3CA0A087WX78 387 aaPredicted RBP11.28□□□□□ -0.6
SMC6-201ENST00000351948 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 OBSL1O75147 1896 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 B4DSR2 109 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 OR4X2Q8NGF9 303 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 DKK1O94907 266 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 PARLQ9H300 379 aa11.28□□□□□ -0.6
SMC6-201ENST00000351948 A6NNC1 897 aa11.27□□□□□ -0.6
SMC6-201ENST00000351948 ZNF343Q6P1L6 599 aa11.27□□□□□ -0.6
SMC6-201ENST00000351948 ARFGEF3Q5TH69 2177 aa11.27□□□□□ -0.6
SMC6-201ENST00000351948 GPX1P07203 203 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 SIAH2O43255 324 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 WNT2P09544 360 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 Q71RC1 249 aaPredicted RBP11.27□□□□□ -0.61
SMC6-201ENST00000351948 PGLYRP4Q96LB8 373 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 TEX50A0A1B0GTY4 177 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 SLX1AQ9BQ83 275 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 CHD8Q9HCK8 2581 aa11.27□□□□□ -0.61
SMC6-201ENST00000351948 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 B4DEV8 164 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 FAM169BQ8N8A8 192 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 PRSS1P07477 247 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 DDB2Q92466 427 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 SPRY4Q9C004 299 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 SRD5A1P18405 259 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 C12orf57Q99622 126 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 VDAC2P45880 294 aaPredicted RBP11.26□□□□□ -0.61
SMC6-201ENST00000351948 TCTAP57738 103 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 ZNF383Q8NA42 475 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
SMC6-201ENST00000351948 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
SMC6-201ENST00000351948 ATP5G3P48201 142 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 ID3Q02535 119 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 FAM74A7A6NL05 159 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 A8MWL6 223 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 M0R2Z0 102 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 TPTE2P1Q5T6R2 138 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 CX3CL1P78423 397 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 ITLN2Q8WWU7 325 aaPredicted RBP11.25□□□□□ -0.61
SMC6-201ENST00000351948 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
SMC6-201ENST00000351948 ABCA2Q9BZC7 2435 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 GLMPQ8WWB7 406 aa11.25□□□□□ -0.61
SMC6-201ENST00000351948 NEU1Q99519 415 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms