RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PROP1O75360 226 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 TMPRSS3P57727 454 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 KLF5Q13887 457 aaPredicted RBP12.6□□□□□ -0.39
LMNA-201ENST00000347559 SMIM21Q3B7S5 101 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 HES3Q5TGS1 186 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 TCF24Q7RTU0 167 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 PINLYPA6NC86 204 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 PRR20EP86478 221 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 PRR20CP86479 221 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 PRR20DP86480 221 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 PRR20BP86481 221 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 PRR20AP86496 221 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
LMNA-201ENST00000347559 CSN3P07498 182 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 UBE2L3P68036 154 aaKnown RBP12.59□□□□□ -0.39
LMNA-201ENST00000347559 PAX2Q02962 417 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 SLC35E4Q6ICL7 350 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 TMEM251Q8N6I4 163 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 C21orf140B9A014 251 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 HIST1H1AQ02539 215 aaPredicted RBP12.59□□□□□ -0.39
LMNA-201ENST00000347559 MLANAQ16655 118 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 WDR31Q8NA23 367 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 OR1N2Q8NGR9 330 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
LMNA-201ENST00000347559 SLC25A10Q9UBX3 287 aaPredicted RBP12.59□□□□□ -0.39
LMNA-201ENST00000347559 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 H3BUT2 72 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 GNG7O60262 68 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 HTR1DP28221 377 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 SLC25A40Q8TBP6 338 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 PI4KAP42356 2102 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 HEATR1Q9H583 2144 aaKnown RBP12.58□□□□□ -0.4
LMNA-201ENST00000347559 VWC2LB2RUY7 222 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 CELA3AP09093 270 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
LMNA-201ENST00000347559 GRAMD2BQ96HH9 432 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 S1PR3Q99500 378 aa12.58□□□□□ -0.4
LMNA-201ENST00000347559 LOC102723996A0A087X1L8 192 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 SPINT2O43291 252 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 C3AR1Q16581 482 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 Q5PR19 223 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 BPIFA4PQ86YQ2 179 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
LMNA-201ENST00000347559 RAB37Q96AX2 223 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 MAP1LC3CQ9BXW4 147 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 AMMECR1Q9Y4X0 333 aaPredicted RBP12.57□□□□□ -0.4
LMNA-201ENST00000347559 HILPDAQ9Y5L2 63 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 TAS2R45P59539 299 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 ARF6P62330 175 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 MORN5Q5VZ52 161 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 MDP1Q86V88 176 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 PRR14LQ5THK1 2151 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 C2CD4DB7Z1M9 353 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 PYYP10082 97 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 GTF2H5Q6ZYL4 71 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 ADAMTS20P59510 1910 aa12.57□□□□□ -0.4
LMNA-201ENST00000347559 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 RASL11AQ6T310 242 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 G3V4G9 280 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 KLF7O75840 302 aaPredicted RBP12.56□□□□□ -0.4
LMNA-201ENST00000347559 WISP2O76076 250 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 LINC00696Q6ZRV3 163 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 TMEM186Q96B77 213 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
LMNA-201ENST00000347559 OR2J3O76001 311 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 SP1P08047 785 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 FABP6P51161 128 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 GNG5P63218 68 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 LYSMD4Q5XG99 296 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 MBD6Q96DN6 1003 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 ZNF835Q9Y2P0 537 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 TNRC6BQ9UPQ9 1833 aaKnown RBP12.55□□□□□ -0.4
LMNA-201ENST00000347559 J3QR06 171 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 CRXO43186 299 aaPredicted RBP12.55□□□□□ -0.4
LMNA-201ENST00000347559 C8orf88P0DMB2 117 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 MRPL49Q13405 166 aaKnown RBP12.55□□□□□ -0.4
LMNA-201ENST00000347559 TMEM97Q5BJF2 176 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 SPINK14Q6IE38 97 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 IDI2-AS1Q9NZ38 188 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
LMNA-201ENST00000347559 PLGLB1Q02325 96 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
LMNA-201ENST00000347559 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
LMNA-201ENST00000347559 HBBP68871 147 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 TMEM116Q8NCL8 245 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 SMPD2O60906 423 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 BHLHA15Q7RTS1 189 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms