RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 C1orf159Q96HA4 380 aa14.99□□□□□ -0.01
HOXA9-201ENST00000343483 SSX3Q99909 188 aa14.99□□□□□ -0.01
HOXA9-201ENST00000343483 KCNIP2Q9NS61 270 aa14.99□□□□□ -0.01
HOXA9-201ENST00000343483 EFNA4P52798 201 aa14.98□□□□□ -0.01
HOXA9-201ENST00000343483 RPL23P62829 140 aaKnown RBP14.98□□□□□ -0.01
HOXA9-201ENST00000343483 TMEM249Q2WGJ8 235 aa14.98□□□□□ -0.01
HOXA9-201ENST00000343483 BSXQ3C1V8 233 aa14.98□□□□□ -0.01
HOXA9-201ENST00000343483 C2orf83Q53S99 150 aa14.98□□□□□ -0.01
HOXA9-201ENST00000343483 FAM210BQ96KR6 192 aa14.98□□□□□ -0.01
HOXA9-201ENST00000343483 TNCP24821 2201 aa14.98□□□□□ -0.01
HOXA9-201ENST00000343483 RNASE2P10153 161 aaKnown RBP14.97□□□□□ -0.01
HOXA9-201ENST00000343483 UBE2G2P60604 165 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 ERHP84090 104 aaKnown RBP14.97□□□□□ -0.01
HOXA9-201ENST00000343483 HIST2H2BCQ6DN03 193 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 A0A1W2PN81 502 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 S100A8P05109 93 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 CNTFRP26992 372 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 CHRNA7P36544 502 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 B2MP61769 119 aa14.97□□□□□ -0.01
HOXA9-201ENST00000343483 FLNBO75369 2602 aaKnown RBP14.96□□□□□ -0.01
HOXA9-201ENST00000343483 M0R1W7 72 aa14.96□□□□□ -0.01
HOXA9-201ENST00000343483 ATP5IP56385 69 aaPredicted RBP14.96□□□□□ -0.01
HOXA9-201ENST00000343483 KLRD1Q13241 179 aa14.96□□□□□ -0.01
HOXA9-201ENST00000343483 RAB31Q13636 194 aa14.96□□□□□ -0.01
HOXA9-201ENST00000343483 CST9LP1Q5W188 147 aa14.96□□□□□ -0.01
HOXA9-201ENST00000343483 C16orf82Q7Z2V1 217 aa14.96□□□□□ -0.01
HOXA9-201ENST00000343483 CELSR2Q9HCU4 2923 aa14.96□□□□□ -0.01
HOXA9-201ENST00000343483 CGB1A6NKQ9 187 aa14.96□□□□□ -0.02
HOXA9-201ENST00000343483 ARL14EPLP0DKL9 152 aa14.96□□□□□ -0.02
HOXA9-201ENST00000343483 WT1-ASQ06250 92 aa14.96□□□□□ -0.02
HOXA9-201ENST00000343483 ASH1LQ9NR48 2969 aaKnown RBP14.95□□□□□ -0.02
HOXA9-201ENST00000343483 LY6LH3BQJ8 138 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 STAG3L2P0CL84 134 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 STAG3L3P0CL85 134 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 HTR1DP28221 377 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 ATP5G3P48201 142 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 LDLRAD2Q5SZI1 272 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 STPG3Q8N7X2 389 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 TEX45Q8NA69 505 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 ABHD5Q8WTS1 349 aa14.95□□□□□ -0.02
HOXA9-201ENST00000343483 CENPEQ02224 2701 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 FNDC10F2Z333 226 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 PDE6DO43924 150 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 ACTL6BO94805 426 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 CXorf1O96002 111 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 TRGC2P03986 189 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 NPPCP23582 126 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 COL8A1P27658 744 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 MRGPRG-AS1Q2M3A8 158 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 TPTE2P1Q5T6R2 138 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 SPNS3Q6ZMD2 512 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 OR11H6Q8NGC7 330 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 A0A1W2PPI3 338 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 A0A1W2PRD5 423 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 A0A1W2PRF3 423 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 A0A1W2PRM7 423 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 INS-IGF2F8WCM5 200 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 ZFP36P26651 326 aaKnown RBP14.94□□□□□ -0.02
HOXA9-201ENST00000343483 PSG5Q15238 335 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 PRSS8Q16651 343 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 MLANAQ16655 118 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 OR51G1Q8NGK1 321 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 HILPDAQ9Y5L2 63 aa14.94□□□□□ -0.02
HOXA9-201ENST00000343483 TRBV24-1A0A075B6N3 115 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 TIMM23O14925 209 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 S100A9P06702 114 aaKnown RBP14.93□□□□□ -0.02
HOXA9-201ENST00000343483 PRTN3P24158 256 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 RPL29P47914 159 aaKnown RBP14.93□□□□□ -0.02
HOXA9-201ENST00000343483 NDUFA6P56556 154 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 GAMTQ14353 236 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 TNXAQ16473 311 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 MMD2Q8IY49 270 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 DPM3Q9P2X0 92 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 H7BYZ3 331 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 REG1AP05451 166 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 GNB1P62873 340 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 LCN2P80188 198 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 TMEM144Q7Z5S9 345 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 NECAP1Q8NC96 275 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 PSMG3-AS1Q96PY0 264 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 TCEAL7Q9BRU2 100 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 SIGLEC9Q9Y336 463 aa14.93□□□□□ -0.02
HOXA9-201ENST00000343483 SETXQ7Z333 2677 aaKnown RBP14.92□□□□□ -0.02
HOXA9-201ENST00000343483 F6UZH7 168 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 TGOLN2O43493 480 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 VENTXO95231 258 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 SMIM6P0DI80 62 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 RHOBP62745 196 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 CD69Q07108 199 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 LHFPL4Q7Z7J7 247 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 BPESC1Q9GZL8 116 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 DOK5Q9P104 306 aa14.92□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BKO60814 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BJP06899 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 CRYGBP07316 175 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BOP23527 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BBP33778 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 CEACAM3P40198 252 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 SUB1P53999 127 aaKnown RBP eCLIP14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BDP58876 126 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms