RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 TAS2R46P59540 309 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 PRR20EP86478 221 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 PRR20CP86479 221 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 PRR20DP86480 221 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 PRR20BP86481 221 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 PRR20AP86496 221 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 OR4A16Q8NH70 328 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 ST8SIA2Q92186 375 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 CMTM3Q96MX0 182 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 TXN2Q99757 166 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 LEMD1Q68G75 181 aa11.95□□□□□ -0.5
H3F3C-201ENST00000340398 H2BFWTQ7Z2G1 175 aa11.95□□□□□ -0.5
H3F3C-201ENST00000340398 FAM24BQ8N5W8 94 aa11.95□□□□□ -0.5
H3F3C-201ENST00000340398 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
H3F3C-201ENST00000340398 TSC22D3Q99576 134 aa11.95□□□□□ -0.5
H3F3C-201ENST00000340398 GNG7O60262 68 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 TMEM127O75204 238 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 DFFBO76075 338 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
H3F3C-201ENST00000340398 IFNA4P05014 189 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 DEFB131AP59861 70 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 HSPE1P61604 102 aaKnown RBP11.94□□□□□ -0.5
H3F3C-201ENST00000340398 TSPAN5P62079 268 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 PRCDQ00LT1 54 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 RBMS2Q15434 407 aaKnown RBP11.94□□□□□ -0.5
H3F3C-201ENST00000340398 MRGPRFQ96AM1 343 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
H3F3C-201ENST00000340398 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
H3F3C-201ENST00000340398 EIF4EP06730 217 aaKnown RBP11.93□□□□□ -0.5
H3F3C-201ENST00000340398 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
H3F3C-201ENST00000340398 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
H3F3C-201ENST00000340398 CROCCP3Q8IVE0 287 aa11.93□□□□□ -0.5
H3F3C-201ENST00000340398 ZNF114Q8NC26 417 aa11.93□□□□□ -0.5
H3F3C-201ENST00000340398 GPX8Q8TED1 209 aa11.93□□□□□ -0.5
H3F3C-201ENST00000340398 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
H3F3C-201ENST00000340398 DNASE2O00115 360 aaPredicted RBP11.92□□□□□ -0.5
H3F3C-201ENST00000340398 RPL11P62913 178 aaKnown RBP11.92□□□□□ -0.5
H3F3C-201ENST00000340398 TMEM187Q14656 261 aa11.92□□□□□ -0.5
H3F3C-201ENST00000340398 MLANAQ16655 118 aa11.92□□□□□ -0.5
H3F3C-201ENST00000340398 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
H3F3C-201ENST00000340398 SNX29P2Q8IUI4 249 aa11.92□□□□□ -0.5
H3F3C-201ENST00000340398 YIPF6Q96EC8 236 aa11.92□□□□□ -0.5
H3F3C-201ENST00000340398 PUS1Q9Y606 427 aaKnown RBP eCLIP11.92□□□□□ -0.5
H3F3C-201ENST00000340398 DNAH6Q9C0G6 4158 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 A0A1B0GU03 582 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 TMEM50AO95807 157 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 C2CD4CQ8TF44 421 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 MFFQ9GZY8 342 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 C11orf68Q9H3H3 251 aaKnown RBP11.91□□□□□ -0.5
H3F3C-201ENST00000340398 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
H3F3C-201ENST00000340398 COMMD3Q9UBI1 195 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 HECTD4Q9Y4D8 3996 aa11.91□□□□□ -0.5
H3F3C-201ENST00000340398 A0A0B4J293 547 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 IGLL5B9A064 214 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 M0QYG6 137 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 GIG44P09565 113 aaPredicted RBP11.9□□□□□ -0.5
H3F3C-201ENST00000340398 PI3P19957 117 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 S100GP29377 79 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 UCP3P55916 312 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 DUSP18Q8NEJ0 188 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 GINS3Q9BRX5 216 aa11.9□□□□□ -0.5
H3F3C-201ENST00000340398 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
H3F3C-201ENST00000340398 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 RBMY1A1P0DJD3 496 aaKnown RBP11.89□□□□□ -0.51
H3F3C-201ENST00000340398 RBMY1CP0DJD4 496 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 ETV6P41212 452 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 NPBWR1P48145 328 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
H3F3C-201ENST00000340398 KCTD21Q4G0X4 260 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 ZNF600Q6ZNG1 722 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 RABAC1Q9UI14 185 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
H3F3C-201ENST00000340398 HERC2O95714 4834 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 CD5P06127 495 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 ELK1P19419 428 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 SNCAP37840 140 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 PPP5CP53041 499 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
H3F3C-201ENST00000340398 STHQ8IWL8 128 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 Q8NAQ8 132 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 TP53RKQ96S44 253 aa11.88□□□□□ -0.51
H3F3C-201ENST00000340398 SMIM31A0A1B0GVY4 71 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 KNCNA6PVL3 124 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 HPGDSO60760 199 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 IFNA17P01571 189 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 RNASE2P10153 161 aaKnown RBP11.87□□□□□ -0.51
H3F3C-201ENST00000340398 PGAM2P15259 253 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 NPPCP23582 126 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 SP6Q3SY56 376 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 PVRIGQ6DKI7 326 aa11.87□□□□□ -0.51
H3F3C-201ENST00000340398 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
H3F3C-201ENST00000340398 IGHV4-28A0A0C4DH34 117 aa11.86□□□□□ -0.51
H3F3C-201ENST00000340398 K7EQG2 157 aa11.86□□□□□ -0.51
H3F3C-201ENST00000340398 P0C879 139 aa11.86□□□□□ -0.51
H3F3C-201ENST00000340398 RCVRNP35243 200 aa11.86□□□□□ -0.51
H3F3C-201ENST00000340398 PIGPP57054 158 aa11.86□□□□□ -0.51
H3F3C-201ENST00000340398 NCS1P62166 190 aa11.86□□□□□ -0.51
H3F3C-201ENST00000340398 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms