RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 CEACAM1P13688 526 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 SRSF1Q07955 248 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLCN6-201ENST00000312413 C1QL4Q86Z23 238 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
CLCN6-201ENST00000312413 DICER1Q9UPY3 1922 aaKnown RBP11.48□□□□□ -0.57
CLCN6-201ENST00000312413 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 SAP25Q8TEE9 199 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 DCTN5Q9BTE1 182 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 SLC25A2Q9BXI2 301 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 GHRHP01286 108 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 CENPVQ7Z7K6 275 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-201ENST00000312413 FAM216BQ8N7L0 139 aa11.48□□□□□ -0.57
CLCN6-201ENST00000312413 FOXH1O75593 365 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 CHCHD2Q9Y6H1 151 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-201ENST00000312413 TRAV8-4A0A0B4J246 113 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 CXCL1P09341 107 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-201ENST00000312413 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 JMJD8Q96S16 334 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 MS4A6AQ9H2W1 248 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 DLEU1O43261 78 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 MCM3APO60318 1980 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 UPK2O00526 184 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 IGKV1D-33P01593 117 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 IGKV1-33P01594 117 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 CD55P08174 381 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 CECR9P0C854 216 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 WFDC1Q9HC57 220 aa11.47□□□□□ -0.57
CLCN6-201ENST00000312413 A0A0G2JLM5 398 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 GLRX5Q86SX6 157 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 IGKCP01834 107 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 RNASE4P34096 147 aaKnown RBP11.46□□□□□ -0.57
CLCN6-201ENST00000312413 FAM90A1Q86YD7 464 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 RNF182Q8N6D2 247 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-201ENST00000312413 C15orf61A6NNL5 157 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 SAA1P0DJI8 122 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-201ENST00000312413 PLNP26678 52 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 C1orf194Q5T5A4 169 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 PPP1R27Q86WC6 154 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 PLPPR1Q8TBJ4 325 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 YAE1D1Q9NRH1 226 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 CYSLTR1Q9Y271 337 aa11.46□□□□□ -0.57
CLCN6-201ENST00000312413 TSKUQ8WUA8 353 aa11.46□□□□□ -0.58
CLCN6-201ENST00000312413 CACNA1DQ01668 2161 aa11.46□□□□□ -0.58
CLCN6-201ENST00000312413 FTH1P19P0C7X4 201 aa11.46□□□□□ -0.58
CLCN6-201ENST00000312413 ORMDL2Q53FV1 153 aa11.46□□□□□ -0.58
CLCN6-201ENST00000312413 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
CLCN6-201ENST00000312413 HEATR5BQ9P2D3 2071 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 IGHV3OR16-8A0A075B7F1 116 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 LINC00271P0C7V0 271 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 FAM201AQ5SY85 155 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 OR9G4Q8NGQ1 327 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 SLC25A15Q9Y619 301 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 UBR3Q6ZT12 1888 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 ERVK11-1P61568 191 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 PSG7Q13046 419 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 RTN4RL2Q86UN3 420 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 FAM89BQ8N5H3 189 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 EFEMP2O95967 443 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 GZMBP10144 247 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 EFNB3Q15768 340 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 LINC00312Q9Y6C7 94 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 ZNF831Q5JPB2 1677 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 PYYP10082 97 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 APOBEC3AP31941 199 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-201ENST00000312413 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 SRSF6Q13247 344 aaKnown RBP11.45□□□□□ -0.58
CLCN6-201ENST00000312413 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 KIR3DL3Q8N743 410 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
CLCN6-201ENST00000312413 TRAV21A0A0B4J279 112 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 YPEL1O60688 119 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 KIAA1217Q5T5P2 1943 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 PVRIGQ6DKI7 326 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 PPP1R32Q7Z5V6 425 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 GTF3AQ92664 365 aaKnown RBP11.44□□□□□ -0.58
CLCN6-201ENST00000312413 YPEL2Q96QA6 119 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 PDLIM4P50479 330 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 CHTOPQ9Y3Y2 248 aaKnown RBP11.44□□□□□ -0.58
CLCN6-201ENST00000312413 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 TIAF1O95411 115 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms