RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CLEC19AQ6UXS0 136 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 BMPERQ8N8U9 685 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 KLK15Q9H2R5 256 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 FAM181BA6NEQ2 426 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 SLC17A3O00476 420 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 ID3Q02535 119 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 CD69Q07108 199 aa13.29□□□□□ -0.28
USP42-201ENST00000306177 NBASA2RRP1 2371 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 DUTP33316 252 aaKnown RBP13.28□□□□□ -0.28
USP42-201ENST00000306177 UQCRFS1P47985 274 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 SDF2L1Q9HCN8 221 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 A0A087WWC5 75 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 THBDP07204 575 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 TAS2R60P59551 318 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 LRTM2Q8N967 370 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 WFIKKN1Q96NZ8 548 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 CEACAM4O75871 244 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 LGALS3P17931 250 aaKnown RBP13.28□□□□□ -0.28
USP42-201ENST00000306177 CACNA1HO95180 2353 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 COX6CP09669 75 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 PAPPA-AS1Q5QFB9 102 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 DNLZQ5SXM8 178 aa13.28□□□□□ -0.28
USP42-201ENST00000306177 H0YIZ8 118 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 IL18BPO95998 194 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 TGFAP01135 160 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 DDTP30046 118 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 ASIPP42127 132 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 ERASQ7Z444 233 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 Q9H3A6 140 aa13.27□□□□□ -0.28
USP42-201ENST00000306177 SOX21Q9Y651 276 aaPredicted RBP13.27□□□□□ -0.28
USP42-201ENST00000306177 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.28
USP42-201ENST00000306177 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.28
USP42-201ENST00000306177 POLEQ07864 2286 aa13.27□□□□□ -0.29
USP42-201ENST00000306177 F8VVB4 439 aa13.27□□□□□ -0.29
USP42-201ENST00000306177 F8VWA3 439 aa13.27□□□□□ -0.29
USP42-201ENST00000306177 FOXA3P55318 350 aaPredicted RBP13.27□□□□□ -0.29
USP42-201ENST00000306177 CIARTQ8N365 385 aaPredicted RBP13.27□□□□□ -0.29
USP42-201ENST00000306177 PRSS8Q16651 343 aa13.27□□□□□ -0.29
USP42-201ENST00000306177 HIST1H4GQ99525 98 aa13.27□□□□□ -0.29
USP42-201ENST00000306177 A0A1B0GUT8 65 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 SRRM5B3KS81 715 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 COL6A6A6NMZ7 2263 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 TRAV9-1A0A075B6T8 112 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 C7orf71A4D174 169 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 PRCDQ00LT1 54 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 FABP2P12104 132 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 Q6AWC8 147 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 LINC00518Q8N0U6 118 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 TNFRSF14Q92956 283 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 PRELID3AQ96N28 172 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 C9JCJ5 164 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
USP42-201ENST00000306177 LYNX1G3V0Z9 82 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 LYNX1P0DP58 116 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 TMEM136Q6ZRR5 245 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 IGKV1-27A0A075B6S5 117 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 A0A1B0GW15 77 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 FBLL1A6NHQ2 334 aaKnown RBP13.25□□□□□ -0.29
USP42-201ENST00000306177 M0R381 172 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 IGHV3OR16-8A0A075B7F1 116 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 LDLRAD4O15165 306 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 OR9G9P0C7N8 305 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 LHFPL1Q86WI0 220 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
USP42-201ENST00000306177 GAGE10A6NGK3 116 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 H7C1H1 209 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 PPP1R17O96001 155 aa13.25□□□□□ -0.29
USP42-201ENST00000306177 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
USP42-201ENST00000306177 CD55P08174 381 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 SOD3P08294 240 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 DMRTA2Q96SC8 542 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 LOC107984156A0A0G2JMH3 177 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 H7C2G1 150 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 NPFFO15130 113 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 TCF21O43680 179 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 ADIPOQQ15848 244 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 COLCA1Q6ZS62 124 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 ARL17AQ8IVW1 177 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 MDS2Q8NDY4 140 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 RPL23P62829 140 aaKnown RBP13.24□□□□□ -0.29
USP42-201ENST00000306177 CIRBPQ14011 172 aaKnown RBP13.24□□□□□ -0.29
USP42-201ENST00000306177 SAMD13Q5VXD3 122 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 MOB4Q9Y3A3 225 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 TCRBV4S1A1TA0A5B7 111 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 K7ERU9 68 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 PMCHL2Q9BQD1 86 aa13.24□□□□□ -0.29
USP42-201ENST00000306177 PRSS2P07478 247 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 NUP37Q8NFH4 326 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 COPS9Q8WXC6 57 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
USP42-201ENST00000306177 IGHV3-11P01762 117 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 IMMP2LQ96T52 175 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms