RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 FOXI3A8MTJ6 420 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 SOCS3O14543 225 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 FAM159AQ6UWV7 190 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 AMN1Q8IY45 258 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 ST6GALNAC2Q9UJ37 374 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 A0A1W2PPC1 479 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 C10orf91Q5T1B1 145 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 TEX38Q6PEX7 206 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 IGHV2OR16-5A0A0B4J2B6 119 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 FOXD3Q9UJU5 478 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 PROCRQ9UNN8 238 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 A0A1W2PPI3 338 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 A0A1W2PPM0 123 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 MGPP08493 103 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 PDFQ9HBH1 243 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 PGLYRP4Q96LB8 373 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 MED29Q9NX70 200 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 CD70P32970 193 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 FAM27BQ5VT28 67 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 METTL27Q8N6F8 245 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 ADAD2Q8NCV1 583 aaKnown RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 PKIGQ9Y2B9 76 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 BPTFQ12830 3046 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 IGLV3-25P01717 112 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 STATHP02808 62 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 GCHFRP30047 84 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 TRA2AQ13595 282 aaKnown RBP eCLIP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 RBMY1FQ15415 496 aaKnown RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 OR11H4Q8NGC9 324 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 OSR1Q8TAX0 266 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 SRSF12Q8WXF0 261 aaKnown RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 HEXA-AS1Q9H8Q6 139 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 KIAA1644Q3SXP7 199 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF488Q96MN9 340 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 IGLV3-27P01718 113 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 EGR2P11161 476 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 CTLA4P16410 223 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF708P17019 499 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF56Q15929 161 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 NKG7Q16617 165 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 Q6ZS52 159 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 CTHRC1Q96CG8 243 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 TRAV21A0A0B4J279 112 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF721Q8TF20 911 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 DDB2Q92466 427 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 WFDC6Q9BQY6 131 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 KLF2Q9Y5W3 355 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 LTBP3Q9NS15 1303 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 A0A1W2PRD5 423 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF815PA8K554 130 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 RPL23P62829 140 aaKnown RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 TM2D1Q9BX74 207 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 C1QL1O75973 258 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF362Q5T0B9 420 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 SLC50A1Q9BRV3 221 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 FAM117AQ9C073 453 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 SIRT4Q9Y6E7 314 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 SPINT1O43278 529 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 MARCH3Q86UD3 253 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 TPRX1Q8N7U7 411 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 H3BMG7 143 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 VSIG8P0DPA2 414 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 DCAF12L2Q5VW00 463 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ALKAL1Q6UXT8 129 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF818PQ6ZRF7 136 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 IL17RELQ6ZVW7 336 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 HAPLN4Q86UW8 402 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 GNRHR2Q96P88 292 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 GP6Q9HCN6 339 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 SEMA5BQ9P283 1151 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 NBEAP1P0C6P0 100 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 TMEM155Q4W5P6 130 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 INO80CQ6PI98 192 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 RNF138Q8WVD3 245 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 EAF1Q96JC9 268 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-201ENST00000297405 IGHG2P01859 326 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 B4GALT1P15291 398 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 FOXB1Q99853 325 aa4.13□□□□□ -1.75
CSMD3-201ENST00000297405 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 C9orf172C9J069 976 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 SHISA5Q8N114 240 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 SPACA5Q96QH8 159 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 FOXC2Q99958 501 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 PRSS27Q9BQR3 290 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 IGFBP3P17936 291 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF137PP52743 207 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 COA6Q5JTJ3 125 aaKnown RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 TSACCQ96A04 125 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 VGLL1Q99990 258 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 KLK13Q9UKR3 277 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 COX8AP10176 69 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 KIAA0040Q15053 153 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 P2RY6Q15077 328 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms