RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 TCTEX1D1Q8N7M0 179 aa11.06□□□□□ -0.64
VHL-201ENST00000256474 RBMXL3Q8N7X1 1067 aaKnown RBP11.06□□□□□ -0.64
VHL-201ENST00000256474 VAMP8Q9BV40 100 aa11.06□□□□□ -0.64
VHL-201ENST00000256474 ZNF355PQ9NSJ1 428 aa11.06□□□□□ -0.64
VHL-201ENST00000256474 CELSR1Q9NYQ6 3014 aa11.06□□□□□ -0.64
VHL-201ENST00000256474 MALRD1Q5VYJ5 2156 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 IGKV1OR2-108A0A075B7D4 117 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 MOSP00540 346 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 TFPI2P48307 235 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 LINC00869P0C866 280 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 TNFSF4P23510 183 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 GNG5P63218 68 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 SEM1Q6ZVN7 128 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 Q6ZWC4 215 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
VHL-201ENST00000256474 NPIPB3Q92617 1050 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 NOL4LQ96MY1 436 aaPredicted RBP11.05□□□□□ -0.64
VHL-201ENST00000256474 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 SLC45A2Q9UMX9 530 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 COX7A2P2O60397 106 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 WNT2P09544 360 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 C1orf159Q96HA4 380 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 SLC35E1Q96K37 410 aa11.05□□□□□ -0.64
VHL-201ENST00000256474 SSBP4Q9BWG4 385 aaPredicted RBP11.05□□□□□ -0.64
VHL-201ENST00000256474 LEMD1Q68G75 181 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 TECRQ9NZ01 308 aaKnown RBP11.04□□□□□ -0.64
VHL-201ENST00000256474 IL19Q9UHD0 177 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 A0A1W2PRD5 423 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 A0A1W2PRF3 423 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 A0A1W2PRM7 423 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 M0R143 59 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 KLK10O43240 276 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 IGHG3P01860 377 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 CD24P25063 80 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 IBA57Q5T440 356 aaKnown RBP11.04□□□□□ -0.64
VHL-201ENST00000256474 KIR3DL3Q8N743 410 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 ASCL2Q99929 193 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 SLC25A17O43808 307 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 TMEM68Q96MH6 324 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
VHL-201ENST00000256474 VPS13CQ709C8 3753 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 TEX50A0A1B0GTY4 177 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 E7EUB6 86 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 APOA2P02652 100 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 MBNL2Q5VZF2 373 aaKnown RBP11.03□□□□□ -0.64
VHL-201ENST00000256474 IGFBPL1Q8WX77 278 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 GSX1Q9H4S2 264 aaPredicted RBP11.03□□□□□ -0.64
VHL-201ENST00000256474 TMEM106BQ9NUM4 274 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 SLC25A10Q9UBX3 287 aaPredicted RBP11.03□□□□□ -0.64
VHL-201ENST00000256474 NOTCH3Q9UM47 2321 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 ATRXP46100 2492 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 CT45A6P0DMU7 189 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 CT45A5P0DMU8 189 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 CT45A7P0DMV0 189 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 MFAP2P55001 183 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 FOXL1Q12952 345 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 PLA2G2CQ5R387 149 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 RNASEH2CQ8TDP1 164 aaKnown RBP11.03□□□□□ -0.64
VHL-201ENST00000256474 FAM168AQ92567 244 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 SAP30LQ9HAJ7 183 aa11.03□□□□□ -0.64
VHL-201ENST00000256474 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
VHL-201ENST00000256474 GGTLC3B5MD39 225 aa11.02□□□□□ -0.64
VHL-201ENST00000256474 GLRXP35754 106 aa11.02□□□□□ -0.64
VHL-201ENST00000256474 ERHP84090 104 aaKnown RBP11.02□□□□□ -0.64
VHL-201ENST00000256474 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.64
VHL-201ENST00000256474 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.64
VHL-201ENST00000256474 TMEM144Q7Z5S9 345 aa11.02□□□□□ -0.65
VHL-201ENST00000256474 RCHY1Q96PM5 261 aa11.02□□□□□ -0.65
VHL-201ENST00000256474 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
VHL-201ENST00000256474 TBL2Q9Y4P3 447 aaKnown RBP11.02□□□□□ -0.65
VHL-201ENST00000256474 TYMSP04818 313 aa11.02□□□□□ -0.65
VHL-201ENST00000256474 TXN2Q99757 166 aa11.02□□□□□ -0.65
VHL-201ENST00000256474 DIRC3C9JPN6 131 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 IGLV1-44P01699 117 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
VHL-201ENST00000256474 ZNF137PP52743 207 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 RAB1CQ92928 201 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 ZNF586Q9NXT0 402 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 TAS2R45P59539 299 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 DYNLRB1Q9NP97 96 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 RNF114Q9Y508 228 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 LYNX1G3V0Z9 82 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 LYNX1P0DP58 116 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 KIR2DS2P43631 304 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
VHL-201ENST00000256474 C1orf162Q8NEQ5 155 aaPredicted RBP11.01□□□□□ -0.65
VHL-201ENST00000256474 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 FLYWCH2Q96CP2 140 aaKnown RBP11.01□□□□□ -0.65
VHL-201ENST00000256474 GAFA1Q96PS6 74 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 TPPP3Q9BW30 176 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 TP53TG3Q9ULZ0 132 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 LSM4Q9Y4Z0 139 aaKnown RBP11.01□□□□□ -0.65
VHL-201ENST00000256474 SPG11Q96JI7 2443 aa11.01□□□□□ -0.65
VHL-201ENST00000256474 hADV38S2A0JD32 116 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms