RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SRIP30626 198 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 ATP5G3P48201 142 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 CR1LQ2VPA4 569 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF585BQ52M93 769 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 PRR27Q6MZM9 219 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 C11orf53Q8IXP5 236 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 PAXXQ9BUH6 204 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 ELOVL1Q9BW60 279 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF430Q9H8G1 570 aaPredicted RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 FOXA2Q9Y261 457 aaPredicted RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 TRAV38-1A0A0B4J264 116 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 HOXA3O43365 443 aaPredicted RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 LHBP01229 141 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 SNRPCP09234 159 aaKnown RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 TNFRSF1AP19438 455 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 PRDX2P32119 198 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 WNT5AP41221 380 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 ACP7Q6ZNF0 438 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 FAM231DQ6ZW35 169 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 BPIFA4PQ86YQ2 179 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 NABP2Q9BQ15 211 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 GGTLC1Q9BX51 225 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 CLCF1Q9UBD9 225 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 MED13Q9UHV7 2174 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 RELNP78509 3460 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 SCO2A0A1W2PP80 73 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 C15orf61A6NNL5 157 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 PMS2P5A8MQ11 134 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 HLA-DRB1P01911 266 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 SLC25A5P05141 298 aaKnown RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 FTH1P19P0C7X4 201 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 CD33P20138 364 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 MPV17P39210 176 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 MFAP2P55001 183 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 SEC11AP67812 179 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 HBBP68871 147 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 PIP4P1Q86T03 277 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 OR52L2PQ8NGH6 319 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 OCC1Q8TAD7 63 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 OSR1Q8TAX0 266 aaPredicted RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 WIPF2Q8TF74 440 aaPredicted RBP3.44□□□□□ -1.86
UBE4A-201ENST00000252108 CT55Q8WUE5 264 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 FAM231BA6NCW3 169 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 TLE1Q04724 770 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 UBE2V1Q13404 147 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 TBR1Q16650 682 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 CT83Q5H943 113 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 LYRM7Q5U5X0 104 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 CABIN1Q9Y6J0 2220 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 DOCK7Q96N67 2140 aa3.44□□□□□ -1.86
UBE4A-201ENST00000252108 A0A0G2JRQ6 117 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 LILRA1O75019 489 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 LEPROTL1O95214 131 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 C1QTNF9P0C862 333 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 MC5RP33032 325 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 Q5PR19 223 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 ASCL5Q7RTU5 278 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF596Q8TC21 504 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 TTTY12Q9BZ98 90 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 MS4A5Q9H3V2 200 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 RAI1Q7Z5J4 1906 aaPredicted RBP3.43□□□□□ -1.86
UBE4A-201ENST00000252108 DMXL2Q8TDJ6 3036 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 TET2Q6N021 2002 aaPredicted RBP3.43□□□□□ -1.86
UBE4A-201ENST00000252108 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 C17orf98A8MV24 154 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 REG1BP48304 166 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 VWA1Q6PCB0 445 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 TREML4Q6UXN2 200 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 MTURNQ8N3F0 131 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 TMEM251Q8N6I4 163 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 SSMEM1Q8WWF3 244 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 DKK4Q9UBT3 224 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 AMMECR1Q9Y4X0 333 aaPredicted RBP3.43□□□□□ -1.86
UBE4A-201ENST00000252108 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.43□□□□□ -1.86
UBE4A-201ENST00000252108 C15orf62A8K5M9 175 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 CRXO43186 299 aaPredicted RBP3.43□□□□□ -1.86
UBE4A-201ENST00000252108 IGHG3P01860 377 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 CELA3AP09093 270 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 HTN3P15516 51 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 HTR1DP28221 377 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 DUTP33316 252 aaKnown RBP3.43□□□□□ -1.86
UBE4A-201ENST00000252108 PPOXP50336 477 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 AESQ08117 197 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 C2orf83Q53S99 150 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 RNFT1Q5M7Z0 435 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 HAPLN4Q86UW8 402 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 FMC1Q96HJ9 113 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF488Q96MN9 340 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 NDFIP1Q9BT67 221 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 SERTM2A0A1B0GWG4 89 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 GRIFINA4D1Z8 144 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 CEACAM4O75871 244 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 EFNB3Q15768 340 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 NSUN5P1Q3KNT7 163 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 SPATA46Q5T0L3 261 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 Q6ZRM9 215 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 C5orf24Q7Z6I8 188 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 FAM169BQ8N8A8 192 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF714Q96N38 554 aa3.43□□□□□ -1.86
UBE4A-201ENST00000252108 IFI27L2Q9H2X8 130 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms