RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 A0A087WWC5 75 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 A0A1B0GWB2 263 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 RNF222A6NCQ9 220 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 APOMO95445 188 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 CEACAM1P13688 526 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
LAMA4-201ENST00000230538 STHQ8IWL8 128 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 YAE1D1Q9NRH1 226 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 TMEM50AO95807 157 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 MALP21145 153 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 BTCP35070 178 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 TFF1P04155 84 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 CD7P09564 240 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 LHX2P50458 406 aa9.67□□□□□ -0.86
LAMA4-201ENST00000230538 GREB1LQ9C091 1923 aaPredicted RBP9.67□□□□□ -0.86
LAMA4-201ENST00000230538 IGKV3D-20A0A0C4DH25 116 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 LDLRAD2Q5SZI1 272 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 LYZL4Q96KX0 146 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 IMMP1LQ96LU5 166 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 A0A1B0GTI1 187 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 LOC105371267A0A1B0GV96 52 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 YPEL1O60688 119 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 UMODP07911 640 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 OR5AN1Q8NGI8 311 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 YPEL2Q96QA6 119 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 RNASE7Q9H1E1 156 aaKnown RBP9.66□□□□□ -0.86
LAMA4-201ENST00000230538 CHD5Q8TDI0 1954 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 C19orf67A6NJJ6 358 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 PTPRZ1P23471 2315 aaPredicted RBP9.66□□□□□ -0.86
LAMA4-201ENST00000230538 C15orf61A6NNL5 157 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 TMEM167AQ8TBQ9 72 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 A0A0G2JMZ2 1700 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 LRRC37A2A6NM11 1700 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 MYOD1P15172 320 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 TMEM144Q7Z5S9 345 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 NR2C2APQ86WQ0 139 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 ST20Q9HBF5 79 aa9.66□□□□□ -0.86
LAMA4-201ENST00000230538 A8MXK9 166 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 ZNF600Q6ZNG1 722 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 RNASE6Q93091 150 aaKnown RBP9.65□□□□□ -0.86
LAMA4-201ENST00000230538 FABP5P3A8MUU1 101 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 TMEM42Q69YG0 159 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 PVRIGQ6DKI7 326 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 ZNF497Q6ZNH5 498 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 NUDT10Q8NFP7 164 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 RPL23P62829 140 aaKnown RBP9.65□□□□□ -0.86
LAMA4-201ENST00000230538 WBP1Q96G27 269 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 ASCL2Q99929 193 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 SLC50A1Q9BRV3 221 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 MORN2Q502X0 79 aa9.65□□□□□ -0.86
LAMA4-201ENST00000230538 ZNF324BQ6AW86 544 aaPredicted RBP9.65□□□□□ -0.86
LAMA4-201ENST00000230538 TYMSP04818 313 aa9.65□□□□□ -0.87
LAMA4-201ENST00000230538 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.87
LAMA4-201ENST00000230538 NPFFR1Q9GZQ6 430 aa9.65□□□□□ -0.87
LAMA4-201ENST00000230538 GSN-AS1Q9NRJ2 163 aa9.65□□□□□ -0.87
LAMA4-201ENST00000230538 ADMP35318 185 aa9.65□□□□□ -0.87
LAMA4-201ENST00000230538 TMEM133Q9H2Q1 129 aa9.65□□□□□ -0.87
LAMA4-201ENST00000230538 SPCS1Q9Y6A9 102 aa9.65□□□□□ -0.87
LAMA4-201ENST00000230538 RAMP3O60896 148 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 IGLV3-19P01714 112 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 FAM169BQ8N8A8 192 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 VCX2Q9H322 139 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 IGKV1D-13A0A0B4J2D9 117 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 IGKV1-13P0DP09 117 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 RNF126Q9BV68 326 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 IFI27P40305 119 aaPredicted RBP9.64□□□□□ -0.87
LAMA4-201ENST00000230538 RNF125Q96EQ8 232 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 LINC00271P0C7V0 271 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 NIT1Q86X76 327 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 OR5A1Q8NGJ0 315 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 TMEM95Q3KNT9 176 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
LAMA4-201ENST00000230538 PRSS22Q9GZN4 317 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 ZNF257Q9Y2Q1 563 aa9.64□□□□□ -0.87
LAMA4-201ENST00000230538 CD24P25063 80 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 TCRBV4S1A1TA0A5B7 111 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 TBX6O95947 436 aaPredicted RBP9.63□□□□□ -0.87
LAMA4-201ENST00000230538 CCL20P78556 96 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 SERF1AO75920 110 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 CA1P00915 261 aaPredicted RBP9.63□□□□□ -0.87
LAMA4-201ENST00000230538 CD55P08174 381 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 A0A0A6YYD4 124 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 THBDP07204 575 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
LAMA4-201ENST00000230538 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
LAMA4-201ENST00000230538 SLC25A20O43772 301 aa9.62□□□□□ -0.87
LAMA4-201ENST00000230538 DUSP14O95147 198 aaKnown RBP9.62□□□□□ -0.87
LAMA4-201ENST00000230538 RHOGP84095 191 aa9.62□□□□□ -0.87
LAMA4-201ENST00000230538 SRSF1Q07955 248 aaKnown RBP eCLIP9.62□□□□□ -0.87
LAMA4-201ENST00000230538 FBLN7Q53RD9 439 aa9.62□□□□□ -0.87
LAMA4-201ENST00000230538 GFI1BQ5VTD9 330 aa9.62□□□□□ -0.87
LAMA4-201ENST00000230538 ZNF815PA8K554 130 aa9.62□□□□□ -0.87
LAMA4-201ENST00000230538 IGHV4-39P01824 125 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms