RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
SCARB2-216ENST00000639300 YPEL2Q96QA6 119 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 MED13Q9UHV7 2174 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 IGHV3OR16-8A0A075B7F1 116 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 LY6G6EA0A0G2JKS1 128 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 FOXA3P55318 350 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-216ENST00000639300 RELBQ01201 579 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 C20orf204Q6ZNR8 217 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 DNM1P46Q6ZS02 220 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 WDR31Q8NA23 367 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 NEU1Q99519 415 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 U3KQA8 63 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 LOC105371242A0A075B767 164 aa12.02□□□□□ -0.48
SCARB2-216ENST00000639300 GFRA3O60609 400 aa12.02□□□□□ -0.48
SCARB2-216ENST00000639300 IL4P05112 153 aa12.02□□□□□ -0.48
SCARB2-216ENST00000639300 NBEAP1P0C6P0 100 aa12.02□□□□□ -0.48
SCARB2-216ENST00000639300 TMEM116Q8NCL8 245 aa12.02□□□□□ -0.48
SCARB2-216ENST00000639300 ELOVL5Q9NYP7 299 aa12.02□□□□□ -0.48
SCARB2-216ENST00000639300 IGHV3OR16-10A0A075B7F0 116 aa12.02□□□□□ -0.49
SCARB2-216ENST00000639300 FAM106CPP0CH98 169 aa12.02□□□□□ -0.49
SCARB2-216ENST00000639300 DDTP30046 118 aa12.02□□□□□ -0.49
SCARB2-216ENST00000639300 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-216ENST00000639300 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-216ENST00000639300 MFAP4P55083 255 aa12.02□□□□□ -0.49
SCARB2-216ENST00000639300 ZCCHC14Q8WYQ9 949 aaKnown RBP12.02□□□□□ -0.49
SCARB2-216ENST00000639300 ELOVL1Q9BW60 279 aa12.02□□□□□ -0.49
SCARB2-216ENST00000639300 PROK2Q9HC23 129 aa12.02□□□□□ -0.49
SCARB2-216ENST00000639300 GCGP01275 180 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 PF4V1P10720 104 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 C1QTNF9P0C862 333 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 TMEM30BQ3MIR4 351 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 ATOH7Q8N100 152 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 DPF1Q92782 380 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 CBY3A6NI87 242 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 TM4SF5O14894 197 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 LOXL3P58215 753 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 MDS2Q8NDY4 140 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 TMEM208Q9BTX3 173 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 C19orf24Q9BVV8 132 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 TMEM189A5PLL7 270 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 CD24P25063 80 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 NTF4P34130 210 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 Q6ZRM9 215 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 TUBA4BQ9H853 241 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 LINC00312Q9Y6C7 94 aa12.01□□□□□ -0.49
SCARB2-216ENST00000639300 FRMPD3Q5JV73 1810 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 SRRM5B3KS81 715 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 ETV2O00321 342 aaPredicted RBP12□□□□□ -0.49
SCARB2-216ENST00000639300 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
SCARB2-216ENST00000639300 RPP25LQ8N5L8 163 aaKnown RBP12□□□□□ -0.49
SCARB2-216ENST00000639300 ANKHD1Q8IWZ3 2542 aaKnown RBP12□□□□□ -0.49
SCARB2-216ENST00000639300 RNF224P0DH78 156 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 TFPI2P48307 235 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 HERPUD1Q15011 391 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 FOXL2NBQ6ZUU3 175 aa12□□□□□ -0.49
SCARB2-216ENST00000639300 ZNF436-AS1Q8NC38 126 aaPredicted RBP12□□□□□ -0.49
SCARB2-216ENST00000639300 COLCA2A8K830 154 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 TMEM144Q7Z5S9 345 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 BMI1P35226 326 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 MAS1LP35410 378 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 FAM90A1Q86YD7 464 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 CBLN4Q9NTU7 201 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 WDR83OSQ9Y284 106 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-216ENST00000639300 IGHV1-46P01743 117 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 ATP5IP56385 69 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-216ENST00000639300 TWIST1Q15672 202 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 TMEM183AQ8IXX5 376 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 DPM3Q9P2X0 92 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 A0A087WWC5 75 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 IGHV3-23P01764 117 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 CA7P43166 264 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
SCARB2-216ENST00000639300 UPK2O00526 184 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 MGPP08493 103 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 MRPL32Q9BYC8 188 aaKnown RBP11.98□□□□□ -0.49
SCARB2-216ENST00000639300 HOXA5P20719 270 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 GPX4P36969 197 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-216ENST00000639300 MEF2CQ06413 473 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-216ENST00000639300 SRSF4Q08170 494 aaKnown RBP11.98□□□□□ -0.49
SCARB2-216ENST00000639300 LY6EQ16553 131 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 CLEC2AQ6UVW9 174 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 LIME1Q9H400 295 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 PLSCR4Q9NRQ2 329 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 HSPB8Q9UJY1 196 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 CFPP27918 469 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 COMPP49747 757 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-216ENST00000639300 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 OR10W1Q8NGF6 305 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 C15orf61A6NNL5 157 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 NPIPB11E5RHQ5 1161 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms