RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 LYL1P12980 280 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 PGAM2P15259 253 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 RNASE10Q5GAN6 216 aaKnown RBP12.88□□□□□ -0.35
HMGN3-203ENST00000620514 GPR141Q7Z602 305 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 OR4D10Q8NGI6 311 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 TMEM56Q96MV1 263 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 TSC22D3Q99576 134 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 CHRDL1Q9BU40 450 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 PALMDQ9NP74 551 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 MTFP1Q9UDX5 166 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 DYNC2H1Q8NCM8 4307 aaKnown RBP12.87□□□□□ -0.35
HMGN3-203ENST00000620514 F8W735 103 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-203ENST00000620514 RND3P61587 244 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 SPCS2Q15005 226 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 OR4A16Q8NH70 328 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 TMEM190Q8WZ59 177 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 HIPK2Q9H2X6 1198 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 UFC1Q9Y3C8 167 aa12.87□□□□□ -0.35
HMGN3-203ENST00000620514 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 CTDSP2O14595 271 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 ADMP35318 185 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 PPP5CP53041 499 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 MARC2Q969Z3 335 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 ISOC1Q96CN7 298 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 BSCL2Q96G97 398 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-203ENST00000620514 TP53RKQ96S44 253 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 FAM110AQ9BQ89 295 aa12.86□□□□□ -0.35
HMGN3-203ENST00000620514 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
HMGN3-203ENST00000620514 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 ELLP55199 621 aaPredicted RBP12.85□□□□□ -0.35
HMGN3-203ENST00000620514 PIGPP57054 158 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 PRCDQ00LT1 54 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 Q56UQ5 140 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 SLC16A13Q7RTY0 426 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 OR2C3Q8N628 320 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
HMGN3-203ENST00000620514 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
HMGN3-203ENST00000620514 RGS5O15539 181 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 ZNF207O43670 478 aaKnown RBP12.84□□□□□ -0.35
HMGN3-203ENST00000620514 CD74P04233 296 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 TBPP20226 339 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
HMGN3-203ENST00000620514 SPSB3Q6PJ21 355 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 CLVS1Q8IUQ0 354 aaPredicted RBP12.84□□□□□ -0.35
HMGN3-203ENST00000620514 OR1L6Q8NGR2 347 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 RYR2Q92736 4967 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 STARD9Q9P2P6 4700 aa12.84□□□□□ -0.35
HMGN3-203ENST00000620514 TRAV25A0A0B4J276 109 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 I3L2K1 104 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 NDUFA4O00483 81 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 RAB3DO95716 219 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 IGHV3-48P01763 117 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 P0C879 139 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 TAS2R19P59542 299 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 SP6Q3SY56 376 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 SCGB2B2Q4G0G5 96 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 FAAP20Q6NZ36 180 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 STEAP1BQ6NZ63 245 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 RBPMS2Q6ZRY4 209 aaKnown RBP12.83□□□□□ -0.36
HMGN3-203ENST00000620514 OR13C8Q8NGS7 320 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 ATP6V0BQ99437 205 aa12.83□□□□□ -0.36
HMGN3-203ENST00000620514 GAR1Q9NY12 217 aaKnown RBP12.83□□□□□ -0.36
HMGN3-203ENST00000620514 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 GABARAPH6UMI1 98 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 MT-CO2P00403 227 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 CTSGP08311 255 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 ZNF114Q8NC26 417 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 TERB2Q8NHR7 220 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 MARCH1Q8TCQ1 289 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 C5orf66Q9H5L9 145 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 DAZ1Q9NQZ3 744 aaKnown RBP12.82□□□□□ -0.36
HMGN3-203ENST00000620514 COPZ2Q9P299 210 aa12.82□□□□□ -0.36
HMGN3-203ENST00000620514 A0A0B4J293 547 aa12.81□□□□□ -0.36
HMGN3-203ENST00000620514 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
HMGN3-203ENST00000620514 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
HMGN3-203ENST00000620514 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
HMGN3-203ENST00000620514 TENM2Q9NT68 2774 aa12.81□□□□□ -0.36
HMGN3-203ENST00000620514 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 A0A0G2JRQ6 117 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 AKR1C2P52895 323 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 MFAP4P55083 255 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
HMGN3-203ENST00000620514 TRIM16LQ309B1 348 aa12.8□□□□□ -0.36
HMGN3-203ENST00000620514 CCDC71LQ8N9Z2 235 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms