RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ARL14EPLP0DKL9 152 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 AREGP15514 252 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 ZNF83P51522 516 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 ARF1P84077 181 aaKnown RBP18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 UNQ5815/PRO19632Q6UWF5 114 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 ZNF497Q6ZNH5 498 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 CORO2AQ92828 525 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 BORCS7Q96B45 105 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 EAF1Q96JC9 268 aaPredicted RBP18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 MBNL3Q9NUK0 354 aaKnown RBP18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 NAT8BQ9UHF3 227 aa18.13■□□□□ 0.49
POLR2J3-220ENST00000613744 HIVEP3Q5T1R4 2406 aa18.12■□□□□ 0.49
POLR2J3-220ENST00000613744 SLC17A3O00476 420 aa18.12■□□□□ 0.49
POLR2J3-220ENST00000613744 RHOGP84095 191 aa18.12■□□□□ 0.49
POLR2J3-220ENST00000613744 TMEM136Q6ZRR5 245 aa18.12■□□□□ 0.49
POLR2J3-220ENST00000613744 PLSCR4Q9NRQ2 329 aa18.12■□□□□ 0.49
POLR2J3-220ENST00000613744 DOCK11Q5JSL3 2073 aa18.12■□□□□ 0.49
POLR2J3-220ENST00000613744 G6PCP35575 357 aa18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 HINT1P49773 126 aaPredicted RBP18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 EIF4EBP1Q13541 118 aaPredicted RBP18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 Q6P435 159 aa18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 SLC24A4Q8NFF2 622 aa18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 MPC1Q9Y5U8 109 aa18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 CDSNQ15517 529 aa18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 MUC15Q8N387 334 aa18.11■□□□□ 0.49
POLR2J3-220ENST00000613744 TRAV9-2A0A087WT02 112 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 C15orf62A8K5M9 175 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 CA2P00918 260 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 DEFA4P12838 97 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 PMCHP20382 165 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 BPIFB3P59826 476 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 RPL31P62899 125 aaKnown RBP18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 GNG3P63215 75 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 OSTCQ9NRP0 149 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 TRAPPC2LQ9UL33 140 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 AMY1AP04745 511 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 LRRC10Q5BKY1 277 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 OR8I2Q8N0Y5 310 aa18.1■□□□□ 0.49
POLR2J3-220ENST00000613744 EDDM3BP56851 147 aa18.09■□□□□ 0.49
POLR2J3-220ENST00000613744 ZNF474Q6S9Z5 364 aaPredicted RBP18.09■□□□□ 0.49
POLR2J3-220ENST00000613744 CRIM1Q9NZV1 1036 aa18.09■□□□□ 0.49
POLR2J3-220ENST00000613744 FAM90A27PA6NNH2 459 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 GCHFRP30047 84 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 GCSAMLQ5JQS6 135 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 ETFRF1Q6IPR1 90 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 H2BFWTQ7Z2G1 175 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 ZDHHC16Q969W1 377 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 HES4Q9HCC6 221 aa18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 YTHDF2Q9Y5A9 579 aaKnown RBP18.08■□□□□ 0.49
POLR2J3-220ENST00000613744 RAMP3O60896 148 aa18.08■□□□□ 0.48
POLR2J3-220ENST00000613744 LYZL6O75951 148 aa18.08■□□□□ 0.48
POLR2J3-220ENST00000613744 RAC2P15153 192 aa18.08■□□□□ 0.48
POLR2J3-220ENST00000613744 SELENOVP59797 346 aa18.08■□□□□ 0.48
POLR2J3-220ENST00000613744 TSKUQ8WUA8 353 aa18.08■□□□□ 0.48
POLR2J3-220ENST00000613744 IGHV1-2P23083 117 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 RASL11AQ6T310 242 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 SCCPDHQ8NBX0 429 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 OR4F17Q8NGA8 305 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 RCHY1Q96PM5 261 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 ADGRG4Q8IZF6 3080 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 ANKRD30BLA7E2S9 258 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 PDLIM3Q53GG5 364 aaPredicted RBP18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 SPATA46Q5T0L3 261 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 Q6ZT83 130 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 Q8IYB0 196 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 ZNF439Q8NDP4 499 aa18.07■□□□□ 0.48
POLR2J3-220ENST00000613744 TRAV34A0A0B4J273 112 aa18.06■□□□□ 0.48
POLR2J3-220ENST00000613744 FAM90A9PA6NNJ1 464 aa18.06■□□□□ 0.48
POLR2J3-220ENST00000613744 J3QT63 122 aa18.06■□□□□ 0.48
POLR2J3-220ENST00000613744 BMPR1BO00238 502 aa18.06■□□□□ 0.48
POLR2J3-220ENST00000613744 CXorf67Q86X51 503 aaPredicted RBP18.06■□□□□ 0.48
POLR2J3-220ENST00000613744 COL12A1Q99715 3063 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 LINC00869P0C866 280 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 FAM27E3Q08E93 113 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 ZNF816Q0VGE8 651 aaPredicted RBP18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 RNF151Q2KHN1 245 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 ZNF488Q96MN9 340 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 GGTLC1Q9BX51 225 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 OR2D2Q9H210 308 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 H0YJW9 148 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 SRIP30626 198 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 GABRA2P47869 451 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 NUDT10Q8NFP7 164 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 WNT10AQ9GZT5 417 aa18.05■□□□□ 0.48
POLR2J3-220ENST00000613744 RRHO14718 337 aa18.04■□□□□ 0.48
POLR2J3-220ENST00000613744 RPL30P62888 115 aaKnown RBP18.04■□□□□ 0.48
POLR2J3-220ENST00000613744 TREML4Q6UXN2 200 aa18.04■□□□□ 0.48
POLR2J3-220ENST00000613744 CLEC7AQ9BXN2 247 aa18.04■□□□□ 0.48
POLR2J3-220ENST00000613744 ZNF503-AS2A6NEH8 195 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 ISLRO14498 428 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 FRMD6-AS1P0C7T7 363 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 VAMP3Q15836 100 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 WIPF2Q8TF74 440 aaPredicted RBP18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 FLNCQ14315 2725 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 GNG4P50150 75 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 POM121L2Q96KW2 1035 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 MGST2Q99735 147 aa18.03■□□□□ 0.48
POLR2J3-220ENST00000613744 SMIM27A0A1W2PRY6 76 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 J3QR06 171 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 OCIAD2Q56VL3 154 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms