RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 BVES-AS1Q5T3Y7 98 aa13.21□□□□□ -0.29
RTN1-209ENST00000611068 UBALD1Q8TB05 177 aa13.21□□□□□ -0.29
RTN1-209ENST00000611068 PSMG3Q9BT73 122 aaPredicted RBP13.21□□□□□ -0.29
RTN1-209ENST00000611068 SPRNQ5BIV9 151 aa13.21□□□□□ -0.3
RTN1-209ENST00000611068 TIMM23BQ5SRD1 257 aa13.21□□□□□ -0.3
RTN1-209ENST00000611068 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.3
RTN1-209ENST00000611068 KCNS1Q96KK3 526 aa13.21□□□□□ -0.3
RTN1-209ENST00000611068 RAMP3O60896 148 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 PDCD6O75340 191 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 GNB1P62873 340 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 ZNF90Q03938 601 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 OR2Z1Q8NG97 314 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 RTL8AQ9BWD3 113 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 RALYQ9UKM9 306 aaKnown RBP13.2□□□□□ -0.3
RTN1-209ENST00000611068 CACNA1AO00555 2505 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 A0A0G2JRQ6 117 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 NTF3P20783 257 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 GNRHRP30968 328 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 CEACAM3P40198 252 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 FGF12P61328 243 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 SERF2P84101 59 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 ZNF718Q3SXZ3 478 aa13.2□□□□□ -0.3
RTN1-209ENST00000611068 WDR61Q9GZS3 305 aaKnown RBP13.2□□□□□ -0.3
RTN1-209ENST00000611068 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 IQCF6A8MYZ5 107 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 SIRPB1O00241 398 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 SLC17A3O00476 420 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 ZNF324O75467 553 aaPredicted RBP13.19□□□□□ -0.3
RTN1-209ENST00000611068 S1PR2O95136 353 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 AZU1P20160 251 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 LRRC75BQ2VPJ9 315 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 FAM58AQ8N1B3 248 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 GTSF1LQ9H1H1 148 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 TRAV26-1A0A087WT03 109 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 NDUFB4O95168 129 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 IAPPP10997 89 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 SMAGPQ0VAQ4 97 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 Q56UQ5 140 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 IL36GQ9NZH8 169 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 ZNF835Q9Y2P0 537 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 ACACBO00763 2458 aa13.19□□□□□ -0.3
RTN1-209ENST00000611068 TRBV20OR9-2A0A075B6H5 130 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 A0A1B0GV72 72 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 C11orf94C9JXX5 98 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 HERV-K104P61576 105 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 ABHD14BQ96IU4 210 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 C16orf97H3BN30 126 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 SPRY3O43610 288 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 C20orf204Q6ZNR8 217 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 ZCCHC24Q8N2G6 241 aaKnown RBP13.18□□□□□ -0.3
RTN1-209ENST00000611068 OR10W1Q8NGF6 305 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 RND1Q92730 232 aa13.18□□□□□ -0.3
RTN1-209ENST00000611068 CACNA1DQ01668 2161 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 MDFIC2A0A1B0GVS7 189 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 FAM90A27PA6NNH2 459 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 CRYBA4P53673 196 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 SELENOVP59797 346 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 J3QT63 122 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
RTN1-209ENST00000611068 MC5RP33032 325 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 GPR6P46095 362 aaPredicted RBP13.17□□□□□ -0.3
RTN1-209ENST00000611068 ATP5G3P48201 142 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 ATP6V0BQ99437 205 aa13.17□□□□□ -0.3
RTN1-209ENST00000611068 TRAV24A0A0B4J272 114 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 H0YJW9 148 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 SPINK4O60575 86 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 PPYP01298 95 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 RAB9AP51151 201 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 KLRB1Q12918 225 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 CDSNQ15517 529 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 OR4P4Q8NGL7 312 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 M0R1X1 148 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 CCL21O00585 134 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 DEGS1O15121 323 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 SCTP09683 121 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 VDAC1P21796 283 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 SPATA12Q7Z6I5 190 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 OR10P1Q8NGE3 313 aa13.16□□□□□ -0.3
RTN1-209ENST00000611068 LRP5LA4QPB2 252 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 GAGE10A6NGK3 116 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 TMPRSS2O15393 492 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 CD40P25942 277 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 S100GP29377 79 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 CA7P43166 264 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 TSKUQ8WUA8 353 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.3
RTN1-209ENST00000611068 BORCS7Q96B45 105 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 SAA2-SAA4A0A096LPE2 208 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 FAM201AQ5SY85 155 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 ZNF818PQ6ZRF7 136 aa13.15□□□□□ -0.3
RTN1-209ENST00000611068 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms